RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 ZNF410Q86VK4 478 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 SLC41A1Q8IVJ1 513 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 HTR3CQ8WXA8 447 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 ZNF606Q8WXB4 792 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 KAZALD1Q96I82 304 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 TINF2Q9BSI4 451 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 ELOVL4Q9GZR5 314 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 FAM50BQ9Y247 325 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 SMAPO00193 183 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 CES2O00748 559 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 PRKAR2AP13861 404 aaKnown RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 SKIV2L2P42285 1042 aaKnown RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 MMP13P45452 471 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 SLC12A3P55017 1021 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 RETSATQ6NUM9 610 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 LRRC6Q86X45 466 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 UTP15Q8TED0 518 aaKnown RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 FAM120BQ96EK7 910 aaKnown RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 ABCG8Q9H221 673 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 WDR41Q9HAD4 459 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 BLOC1S6Q9UL45 172 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 SAC3D1A6NKF1 404 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 RAD51BO15315 384 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 TOMM70O94826 608 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 DDR2Q16832 855 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 CBWD6Q4V339 395 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 ARMC12Q5T9G4 340 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 TYW3Q6IPR3 259 aaKnown RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 CATSPERGQ6ZRH7 1159 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 MTDHQ86UE4 582 aaKnown RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 MTERF3Q96E29 417 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 FRMD8P1Q9BZ68 369 aaPredicted RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 WHRNQ9P202 907 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 ACOT9Q9Y305 439 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 CTPS1P17812 591 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 CSTF3Q12996 717 aaKnown RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 PREPLQ4J6C6 727 aaPredicted RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 ZC3H12AQ5D1E8 599 aaKnown RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 IQSEC1Q6DN90 963 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 TTI2Q6NXR4 508 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 FIBCD1Q8N539 461 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 DNAJC1Q96KC8 554 aaKnown RBP11.43□□□□□ -0.58
LINC00346-201ENST00000538077 TM6SF2Q9BZW4 377 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 DPY30Q9C005 99 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 FAM198AQ9UFP1 575 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 POLR1DQ9Y2S0 133 aa11.43□□□□□ -0.58
LINC00346-201ENST00000538077 CEMIPQ8WUJ3 1361 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 HLA-DQA2P01906 255 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 TPBGLP0DKB5 382 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 SLC6A3Q01959 620 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 RCN1Q15293 331 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 SCARA3Q6AZY7 606 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 FBXO39Q8N4B4 442 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 SPPL2AQ8TCT8 520 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 CCDC126Q96EE4 140 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 MAGEB18Q96M61 343 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 CDHR5Q9HBB8 845 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 PARVBQ9HBI1 364 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 ASAH2Q9NR71 780 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 MRPS23Q9Y3D9 190 aaKnown RBP11.42□□□□□ -0.58
LINC00346-201ENST00000538077 H0YC42 278 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 MPOP05164 745 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 RARGP13631 454 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 CD151P48509 253 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 PRKAG1P54619 331 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 USP45Q70EL2 814 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 ATG16L2Q8NAA4 619 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 OR10G6Q8NH81 332 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 ELMO1Q92556 727 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 PPCSQ9HAB8 311 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 SEMA4BQ9NPR2 832 aaPredicted RBP11.42□□□□□ -0.58
LINC00346-201ENST00000538077 MORC2Q9Y6X9 1032 aaPredicted RBP11.42□□□□□ -0.58
LINC00346-201ENST00000538077 ADAMTS13Q76LX8 1427 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 DLGAP3O95886 979 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 IL1BP01584 269 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 PTPN1P18031 435 aaKnown RBP11.42□□□□□ -0.58
LINC00346-201ENST00000538077 HNF4AP41235 474 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 ELK3P41970 407 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 C21orf59P57076 290 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 GALNT3Q14435 633 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 FGD3Q5JSP0 725 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 TCHHL1Q5QJ38 904 aaPredicted RBP11.42□□□□□ -0.58
LINC00346-201ENST00000538077 ZCCHC23Q6ZST2 131 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 FAM183BPQ6ZVS7 135 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 CEP68Q76N32 757 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 MILR1Q7Z6M3 343 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 MYLPFQ96A32 169 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 SKA1Q96BD8 255 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 DCLK3Q9C098 648 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 POPDC2Q9HBU9 364 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 MARCH2Q9P0N8 246 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 PIK3CDO00329 1044 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 AXLP30530 894 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 SEC13P55735 322 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 CHRNB3Q05901 458 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 STX5Q13190 355 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 DSG4Q86SJ6 1040 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 CCT8L1PA6NM43 557 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 RBP1P09455 135 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 TGFB3P10600 412 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms