RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CHKAP35790 457 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ELK3P41970 407 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 CDK8P49336 464 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 KCNK18Q7Z418 384 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 FAM9CQ8IZT9 166 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 FAM49BQ9NUQ9 324 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 RPL26L1Q9UNX3 145 aaKnown RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 NRKQ7Z2Y5 1582 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF879B4DU55 563 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ZBTB24O43167 697 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SNAP91O60641 907 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 RHOBTB3O94955 611 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SERPIND1P05546 499 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ETS1P14921 441 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 LIN54Q6MZP7 749 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 KCNV1Q6PIU1 500 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ZCCHC9Q8N567 271 aaKnown RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 GANCQ8TET4 914 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 VTI1BQ9UEU0 232 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 UBE2QL1A1L167 161 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 STMND1H3BQB6 276 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PDLIM1O00151 329 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SIN3BO75182 1162 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 GABBR2O75899 941 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 BTN3A2P78410 334 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 TBX2Q13207 712 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PHKG1Q16816 387 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 USP39Q53GS9 565 aaKnown RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 CYP4Z1Q86W10 505 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 TCF12Q99081 682 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PLAGL2Q9UPG8 496 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PON1P27169 355 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 AKT1P31749 480 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 CDK7P50613 346 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 KCTD2Q14681 263 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 KLHDC10Q6PID8 442 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 FRMD7Q6ZUT3 714 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF571Q7Z3V5 609 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 AFG1LQ8WV93 481 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SLC4A5Q9BY07 1137 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 FKBP14Q9NWM8 211 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 WWOXQ9NZC7 414 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PACSIN3Q9UKS6 424 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 CD109Q6YHK3 1445 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 YLPM1P49750 1951 aaKnown RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 CCDC154A6NI56 674 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 GSC2O15499 205 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 EIF2S3P41091 472 aaKnown RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 HSD17B4P51659 736 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 OR2B6P58173 313 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 DDX39BQ13838 428 aaKnown RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SKIV2LQ15477 1246 aaKnown RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SCN4BQ8IWT1 228 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SPATA7Q9P0W8 599 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 GJA3Q9Y6H8 435 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ANXA6P08133 673 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 RGS4P49798 205 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 HIRAP54198 1017 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SEMA3AQ14563 771 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ZNF267Q14586 743 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 NR6A1Q15406 480 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 TRAPPC3LQ5T215 181 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 DNAAF5Q86Y56 855 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 CDYL2Q8N8U2 506 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 MBOAT7Q96N66 472 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 EBF3Q9H4W6 596 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 EDARQ9UNE0 448 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 ARHGAP21Q5T5U3 1957 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 MSLNQ13421 630 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PMF1Q6P1K2 205 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 PQLC1Q8N2U9 271 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SH3RF3Q8TEJ3 882 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 CAB39LQ9H9S4 337 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 SLCO1B3Q9NPD5 702 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 FBXO6Q9NRD1 293 aaPredicted RBP5.78□□□□□ -1.48
CSMD1-215ENST00000537824 AKAP12Q02952 1782 aa5.78□□□□□ -1.48
CSMD1-215ENST00000537824 VAPBO95292 243 aa5.77□□□□□ -1.48
CSMD1-215ENST00000537824 CTDNEP1O95476 244 aa5.77□□□□□ -1.48
CSMD1-215ENST00000537824 MLNP12872 115 aa5.77□□□□□ -1.48
CSMD1-215ENST00000537824 TCF4P15884 667 aa5.77□□□□□ -1.48
CSMD1-215ENST00000537824 ACAD10Q6JQN1 1059 aa5.77□□□□□ -1.48
CSMD1-215ENST00000537824 ARHGAP36Q6ZRI8 547 aa5.77□□□□□ -1.48
CSMD1-215ENST00000537824 GPRASP2Q96D09 838 aa5.77□□□□□ -1.48
CSMD1-215ENST00000537824 CLPTM1LQ96KA5 538 aa5.77□□□□□ -1.48
CSMD1-215ENST00000537824 ART5Q96L15 291 aa5.77□□□□□ -1.48
CSMD1-215ENST00000537824 NCF1BA6NI72 391 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 NCF1CA8MVU1 366 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 LTFP02788 710 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 NCF1P14598 390 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PEX2P28328 305 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 CRKP46108 304 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 IDH2P48735 452 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 NPEPPSP55786 919 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 LACTB2Q53H82 288 aaPredicted RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 RNASE12Q5GAN4 147 aaKnown RBP5.77□□□□□ -1.49
CSMD1-215ENST00000537824 PHC2Q8IXK0 858 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 SPAG16Q8N0X2 631 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 EMC1Q8N766 993 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 FAM47BQ8NA70 645 aa5.77□□□□□ -1.49
CSMD1-215ENST00000537824 AP3S1Q92572 193 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms