RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 NME5P56597 212 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 UBE2SQ16763 222 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM47AQ5JRC9 791 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 ZFYVE27Q5T4F4 411 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 TEDDM1Q5T9Z0 273 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 SH2D5Q6ZV89 423 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 KCTD20Q7Z5Y7 419 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 PARP8Q8N3A8 854 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 GLMNQ92990 594 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC39A13Q96H72 371 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 FEM1CQ96JP0 617 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 SENP7Q9BQF6 1050 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 ACAT2Q9BWD1 397 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 CHID1Q9BWS9 393 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 ZHX3Q9H4I2 956 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 ATP13A3Q9H7F0 1226 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 DNAJC28Q9NX36 388 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 NUP50Q9UKX7 468 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 TRPC5Q9UL62 973 aaPredicted RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 CCDC195A0A1B0GUA6 201 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 CENPXA8MT69 81 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 hCG_2039718K7EN88 272 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 FOXN3O00409 490 aaPredicted RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 KRT37O76014 449 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 RALAP11233 206 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 TBXAS1P24557 533 aaPredicted RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 OR3A3P47888 321 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 FMO5P49326 533 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 NUDT2P50583 147 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 NLRP11P59045 1033 aaKnown RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 BFSP2Q13515 415 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 NEDD8Q15843 81 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 C5orf22Q49AR2 442 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 PIGGQ5H8A4 983 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 CCNJQ5T5M9 372 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 RNASEH2BQ5TBB1 312 aaKnown RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 LDHAL6AQ6ZMR3 332 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 BRSK2Q8IWQ3 736 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 GIMAP5Q96F15 307 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 CEP19Q96LK0 163 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 HEMGNQ9BXL5 484 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 PLEKHA5Q9HAU0 1116 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 HOMER2Q9NSB8 354 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 C20orf96Q9NUD7 363 aaPredicted RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 DDX28Q9NUL7 540 aaKnown RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 CHORDC1Q9UHD1 332 aaPredicted RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 WBP11Q9Y2W2 641 aaKnown RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 PCDHB13Q9Y5F0 798 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 ZNF335Q9H4Z2 1342 aaPredicted RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 POTEMA6NI47 508 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 TK2O00142 265 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 PHGDHO43175 533 aaKnown RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM155BO75949 473 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 RBL1P28749 1068 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 CCND2P30279 289 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 MAPK4P31152 587 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 PSMC2P35998 433 aaKnown RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 CASP3P42574 277 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 MLLT10P55197 1068 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 IFITM3Q01628 133 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 NAB1Q13506 487 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 SNAP47Q5SQN1 464 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 LDLRAP1Q5SW96 308 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 TTC39BQ5VTQ0 682 aaPredicted RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM205BPQ63HN1 556 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 ZNF746Q6NUN9 644 aaPredicted RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 CLYBLQ8N0X4 340 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 PACRGLQ8N7B6 248 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 TBCKQ8TEA7 893 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC20A1Q8WUM9 679 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 JPH3Q8WXH2 748 aaPredicted RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 MAGED4Q96JG8 741 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 GLT1D1Q96MS3 346 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 TMEM246Q9BRR3 403 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 SEMA6AQ9H2E6 1030 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 ZNF395Q9H8N7 513 aaPredicted RBP8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 TRIM39Q9HCM9 518 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 VPS4AQ9UN37 437 aa8.72□□□□□ -1.01
SRGAP1-202ENST00000537556 CROCCQ5TZA2 2017 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 GOLGA8JA6NMD2 632 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 AIM2O14862 343 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 RAD51BO15315 384 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 PDPK1O15530 556 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 KCNH1O95259 989 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 CPNE6O95741 557 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 SERPINB2P05120 415 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 BPGMP07738 259 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 GFAPP14136 432 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 SERPINB10P48595 397 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 ILF2Q12905 390 aaKnown RBP8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 PTP4A2Q12974 167 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 COG2Q14746 738 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 ERAP2Q6P179 960 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 ABRAXAS1Q6UWZ7 409 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 CPNE8Q86YQ8 564 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 UBR7Q8N806 425 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 ANKRD53Q8N9V6 530 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC44A1Q8WWI5 657 aa8.71□□□□□ -1.01
SRGAP1-202ENST00000537556 INTS2Q9H0H0 1204 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms