RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 GPR179Q6PRD1 2367 aa17.89■□□□□ 0.45
GPN3-202ENST00000537466 A0A1W2PQJ5 194 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 TCRBV5S1A1TA0A578 114 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 C2CD4BA6NLJ0 364 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 TMCO5BA8MYB1 307 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 ALDH1A2O94788 518 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 F9P00740 461 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 GABRG2P18507 467 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 ATP11AP98196 1134 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 C1QBPQ07021 282 aaKnown RBP17.88■□□□□ 0.45
GPN3-202ENST00000537466 CDH18Q13634 790 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 ENPP2Q13822 863 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 CCDC14Q49A88 953 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 SH3PXD2AQ5TCZ1 1133 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 MBLAC2Q68D91 279 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 SND1Q7KZF4 910 aaKnown RBP eCLIP17.88■□□□□ 0.45
GPN3-202ENST00000537466 DNAAF5Q86Y56 855 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 C3orf20Q8ND61 904 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 CPLX3Q8WVH0 158 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 SIK2Q9H0K1 926 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 BCCIPQ9P287 314 aaKnown RBP eCLIP17.88■□□□□ 0.45
GPN3-202ENST00000537466 INTS6Q9UL03 887 aaKnown RBP17.88■□□□□ 0.45
GPN3-202ENST00000537466 VANGL2Q9ULK5 521 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 SDK1Q7Z5N4 2213 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 TNRC6BQ9UPQ9 1833 aaKnown RBP17.88■□□□□ 0.45
GPN3-202ENST00000537466 ZNF292O60281 2723 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 H0Y626 953 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 TIMM44O43615 452 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 ENDOD1O94919 500 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 KRT3P12035 628 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 PDGFRAP16234 1089 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 PRKCHP24723 683 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 RDXP35241 583 aaKnown RBP17.88■□□□□ 0.45
GPN3-202ENST00000537466 RFC1P35251 1148 aaPredicted RBP17.88■□□□□ 0.45
GPN3-202ENST00000537466 KLHL30Q0D2K2 578 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 PTPRNQ16849 979 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 CDO1Q16878 200 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 KBTBD6Q86V97 674 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 FAM131BQ86XD5 332 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 MCOLN2Q8IZK6 566 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 FAM160A2Q8N612 972 aaPredicted RBP17.88■□□□□ 0.45
GPN3-202ENST00000537466 RLN3Q8WXF3 142 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 RUBCNQ92622 972 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 RPRD1AQ96P16 312 aaPredicted RBP17.88■□□□□ 0.45
GPN3-202ENST00000537466 SELENOOQ9BVL4 669 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 SLC6A17Q9H1V8 727 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 NCDNQ9UBB6 729 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 RAB23Q9ULC3 237 aa17.88■□□□□ 0.45
GPN3-202ENST00000537466 CFAP54Q96N23 3096 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 DDX3XO00571 662 aaKnown RBP eCLIP17.87■□□□□ 0.453e-22■■■■■ 55.7
GPN3-202ENST00000537466 NPC1O15118 1278 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 GYPCP04921 128 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 RRM1P23921 792 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 SDC4P31431 198 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 MTA1Q13330 715 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 RABGAP1LQ5R372 815 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 LAIR1Q6GTX8 287 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 WDR59Q6PJI9 974 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 CCAR2Q8N163 923 aaKnown RBP17.87■□□□□ 0.45
GPN3-202ENST00000537466 PGBD3Q8N328 593 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 FRMD1Q8N878 549 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 ZNF557Q8N988 423 aaPredicted RBP17.87■□□□□ 0.45
GPN3-202ENST00000537466 HINFPQ9BQA5 517 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 CAPN11Q9UMQ6 739 aa17.87■□□□□ 0.45
GPN3-202ENST00000537466 EP300Q09472 2414 aaPredicted RBP17.86■□□□□ 0.45
GPN3-202ENST00000537466 SIGLEC16A6NMB1 481 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 HLA-EP13747 358 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 POLR2EP19388 210 aaKnown RBP17.86■□□□□ 0.45
GPN3-202ENST00000537466 NDUFV2P19404 249 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 CSKP41240 450 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 PTPN9P43378 593 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 NUMBP49757 651 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 C5orf22Q49AR2 442 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 USP39Q53GS9 565 aaKnown RBP17.86■□□□□ 0.45
GPN3-202ENST00000537466 PITRM1Q5JRX3 1037 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 PPP1R15BQ5SWA1 713 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 ARTNQ5T4W7 220 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 TTC39BQ5VTQ0 682 aaPredicted RBP17.86■□□□□ 0.45
GPN3-202ENST00000537466 HGSNATQ68CP4 663 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 DNAJC24Q6P3W2 148 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 SERPINA13PQ6UXR4 307 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.86■□□□□ 0.45
GPN3-202ENST00000537466 CCDC117Q8IWD4 279 aaPredicted RBP17.86■□□□□ 0.45
GPN3-202ENST00000537466 ZNF683Q8IZ20 524 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 ZNF366Q8N895 744 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 DUSP15Q9H1R2 295 aaPredicted RBP17.86■□□□□ 0.45
GPN3-202ENST00000537466 TMEM245Q9H330 911 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 PAXBP1Q9Y5B6 917 aa17.86■□□□□ 0.45
GPN3-202ENST00000537466 ITIH6Q6UXX5 1313 aa17.85■□□□□ 0.45
GPN3-202ENST00000537466 A0A1B0GVM2 712 aa17.85■□□□□ 0.45
GPN3-202ENST00000537466 TCAF2A6NFQ2 919 aa17.85■□□□□ 0.45
GPN3-202ENST00000537466 ATMINO43313 823 aaPredicted RBP17.85■□□□□ 0.45
GPN3-202ENST00000537466 DLDP09622 509 aaKnown RBP17.85■□□□□ 0.45
GPN3-202ENST00000537466 GPD1P21695 349 aa17.85■□□□□ 0.45
GPN3-202ENST00000537466 BCKDHBP21953 392 aa17.85■□□□□ 0.45
GPN3-202ENST00000537466 RPL7AP62424 266 aaKnown RBP17.85■□□□□ 0.45
GPN3-202ENST00000537466 ZBED6P86452 979 aa17.85■□□□□ 0.45
GPN3-202ENST00000537466 PLK5Q496M5 336 aa17.85■□□□□ 0.45
GPN3-202ENST00000537466 FNDC3BQ53EP0 1204 aaKnown RBP17.85■□□□□ 0.45
GPN3-202ENST00000537466 CXorf57Q6NSI4 855 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms