RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CCNA1P78396 465 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 IFRD2Q12894 506 aaPredicted RBP14.7□□□□□ -0.06
USP44-203ENST00000537435 PID1Q7Z2X4 250 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 MAVSQ7Z434 540 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 MYLK4Q86YV6 388 aaPredicted RBP14.7□□□□□ -0.06
USP44-203ENST00000537435 KBTBD2Q8IY47 623 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 PPP4R1Q8TF05 950 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 CERS2Q96G23 380 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 SORT1Q99523 831 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 STN1Q9H668 368 aaKnown RBP14.7□□□□□ -0.06
USP44-203ENST00000537435 PRDM16Q9HAZ2 1276 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 PNPOQ9NVS9 261 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 GDAP2Q9NXN4 497 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 COPG2Q9UBF2 871 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 RPS6KL1Q9Y6S9 549 aa14.7□□□□□ -0.06
USP44-203ENST00000537435 MYO18AQ92614 2054 aaKnown RBP14.7□□□□□ -0.06
USP44-203ENST00000537435 M0QYT0 321 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 CLDN5O00501 218 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 PPP1R12AO14974 1030 aaPredicted RBP14.69□□□□□ -0.06
USP44-203ENST00000537435 POLBP06746 335 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 ANPEPP15144 967 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 CPOXP36551 454 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 GP5P40197 560 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 TAF6P49848 677 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 SLC25A3Q00325 362 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 NME3Q13232 169 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 LBRQ14739 615 aaKnown RBP14.69□□□□□ -0.06
USP44-203ENST00000537435 DGKDQ16760 1214 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 INSCQ1MX18 579 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 DPY19L2Q6NUT2 758 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 RSPH3Q86UC2 560 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 OSTM1Q86WC4 334 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 SLC25A41Q8N5S1 370 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 YIPF3Q9GZM5 350 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 ZNF358Q9NW07 568 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 IGSF9Q9P2J2 1179 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 KCNK1O00180 336 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 BEST1O76090 585 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 GRK2P25098 689 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 ARRB2P32121 409 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 NOS2P35228 1153 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 NDUFV1P49821 464 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 SOX4Q06945 474 aaPredicted RBP14.69□□□□□ -0.06
USP44-203ENST00000537435 CMC1Q7Z7K0 106 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 POU5F2Q8N7G0 328 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 B3GALNT2Q8NCR0 500 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 OR52K1Q8NGK4 314 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 SHKBP1Q8TBC3 707 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 TNIP3Q96KP6 325 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 FCRL3Q96P31 734 aaPredicted RBP14.69□□□□□ -0.06
USP44-203ENST00000537435 AGAP3Q96P47 875 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 NPY6RQ99463 290 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 ZNF184Q99676 751 aaPredicted RBP14.69□□□□□ -0.06
USP44-203ENST00000537435 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 DLGAP2Q9P1A6 1054 aa14.69□□□□□ -0.06
USP44-203ENST00000537435 SF3B1O75533 1304 aaKnown RBP eCLIP14.68□□□□□ -0.06
USP44-203ENST00000537435 A0A088AWK7 358 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 RRN3P2A6NIE6 340 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 EEF2KO00418 725 aaKnown RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 SIN3BO75182 1162 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 KLHL2O95198 593 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 DARSP14868 501 aaKnown RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 PNPLA4P41247 253 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 GARSP41250 739 aaKnown RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 IDH3AP50213 366 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 AP2B1P63010 937 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 SNAPC2Q13487 334 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 ITGA9Q13797 1035 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 PAFAH1B3Q15102 231 aaKnown RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 DUSP28Q4G0W2 176 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 SYPL2Q5VXT5 272 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 NT5C3BQ969T7 300 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 ATXN7L3BQ96GX2 97 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 CPNE1Q99829 537 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 DUSP16Q9BY84 665 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 SNX15Q9NRS6 342 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 KLHL8Q9P2G9 620 aaPredicted RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 STAP1Q9ULZ2 295 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 PIN4Q9Y237 131 aaKnown RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 RALGAPA2Q2PPJ7 1873 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 ADCY6O43306 1168 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 HUS1O60921 280 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 USP12O75317 370 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 RALBP11234 206 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 HOXD8P13378 290 aaPredicted RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 SP100P23497 879 aaPredicted RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 ACAT1P24752 427 aaKnown RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 CCNHP51946 323 aaPredicted RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 GTF2A2P52657 109 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 ABCE1P61221 599 aaKnown RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 DEUP1Q05D60 604 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 DPYSQ14117 519 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 R3HDM1Q15032 1099 aaKnown RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 SPANXN3Q5MJ09 141 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 GRTP1Q5TC63 336 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 BNIPLQ7Z465 357 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 DCLK2Q8N568 766 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 TTC1Q99614 292 aa14.68□□□□□ -0.06
USP44-203ENST00000537435 HNRNPABQ99729 332 aaKnown RBP14.68□□□□□ -0.06
USP44-203ENST00000537435 DNAI2Q9GZS0 605 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms