RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 TGS1Q96RS0 853 aaKnown RBP8.46□□□□□ -1.05
ABCA4-207ENST00000536513 TTC1Q99614 292 aa8.46□□□□□ -1.05
ABCA4-207ENST00000536513 SMG9Q9H0W8 520 aaKnown RBP8.46□□□□□ -1.05
ABCA4-207ENST00000536513 PLXNA1Q9UIW2 1896 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 PSTPIP1O43586 416 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 KCNE1P15382 129 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 C1QTNF8P60827 252 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 USP46P62068 366 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 PTP4A2Q12974 167 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 TCEAL1Q15170 157 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 STILQ15468 1287 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 LRRC36Q1X8D7 754 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 LRRC26Q2I0M4 334 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 RAP1GAP2Q684P5 730 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 OLFML1Q6UWY5 402 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 NECAB2Q7Z6G3 386 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 UNC93AQ86WB7 457 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 DCP1BQ8IZD4 617 aaKnown RBP8.46□□□□□ -1.06
ABCA4-207ENST00000536513 IQCKQ8N0W5 287 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 PPM1NQ8N819 430 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 HIPK4Q8NE63 616 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 TTC8Q8TAM2 541 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 GSDMBQ8TAX9 411 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 MAIP1Q8WWC4 291 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 SNF8Q96H20 258 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 LRRC4CQ9HCJ2 640 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 SMYD2Q9NRG4 433 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 KIAA1257Q9ULG3 409 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 PCDHGC3Q9UN70 934 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 FAF1Q9UNN5 650 aaPredicted RBP8.46□□□□□ -1.06
ABCA4-207ENST00000536513 PCDHB5Q9Y5E4 795 aa8.46□□□□□ -1.06
ABCA4-207ENST00000536513 hCG_1818297A0A087WSY0 165 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 A8MUI8 341 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 PIRTP0C851 137 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 HOXD8P13378 290 aaPredicted RBP8.45□□□□□ -1.06
ABCA4-207ENST00000536513 HSPA6P17066 643 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 ZBTB6Q15916 424 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 INTS6LQ5JSJ4 861 aaKnown RBP8.45□□□□□ -1.06
ABCA4-207ENST00000536513 LRIG3Q6UXM1 1119 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 RNF19BQ6ZMZ0 732 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 SPATA24Q86W54 205 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 FAM126BQ8IXS8 530 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 BADQ92934 168 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 VCPIP1Q96JH7 1222 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 FERMT1Q9BQL6 677 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 CCSER2Q9H7U1 834 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 DDX56Q9NY93 547 aaKnown RBP8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TRIM33Q9UPN9 1127 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 ARL2BPQ9Y2Y0 163 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 LCTP09848 1927 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 GABBR2O75899 941 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 MYOGP15173 224 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 ITGB8P26012 769 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TARSP26639 723 aaKnown RBP8.45□□□□□ -1.06
ABCA4-207ENST00000536513 MAN1A1P33908 653 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 GRIA1P42261 906 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 CDKN2BP42772 138 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 ALDH1A3P47895 512 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 FAAP100Q0VG06 881 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 CBX2Q14781 532 aaPredicted RBP8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TCTN1Q2MV58 587 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 BOLA3Q53S33 107 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 ANKRD22Q5VYY1 191 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 PDIK1LQ8N165 341 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TOP6BLQ8N6T0 577 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 IPMKQ8NFU5 416 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 KLHL5Q96PQ7 755 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TTPALQ9BTX7 342 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 PCDH18Q9HCL0 1135 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 FAM8A1Q9UBU6 413 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 CDH9Q9ULB4 789 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 WDR90Q96KV7 1748 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 MAP1BP46821 2468 aaKnown RBP8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TCRBV7S3A2A0A539 114 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 PMM2O15305 246 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 NVLO15381 856 aaKnown RBP8.45□□□□□ -1.06
ABCA4-207ENST00000536513 URODP06132 367 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 PYGLP06737 847 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 CLTBP09497 229 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TROVE2P10155 538 aaKnown RBP eCLIP8.45□□□□□ -1.06
ABCA4-207ENST00000536513 KLRC2P26717 231 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 ACADSBP45954 432 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TUBP50607 506 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TMPRSS15P98073 1019 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TAP1Q03518 808 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 AGBL2Q5U5Z8 902 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 PAQR9Q6ZVX9 377 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TAC4Q86UU9 113 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TTC39CQ8N584 583 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 FAM161BQ96MY7 647 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 LHX5Q9H2C1 402 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 C12orf65Q9H3J6 166 aaKnown RBP8.45□□□□□ -1.06
ABCA4-207ENST00000536513 CDC42EP4Q9H3Q1 356 aaKnown RBP8.45□□□□□ -1.06
ABCA4-207ENST00000536513 PRDM12Q9H4Q4 367 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 TXNDC16Q9P2K2 825 aa8.45□□□□□ -1.06
ABCA4-207ENST00000536513 SF3B1O75533 1304 aaKnown RBP eCLIP8.44□□□□□ -1.06
ABCA4-207ENST00000536513 A0A0G2JND7 137 aa8.44□□□□□ -1.06
ABCA4-207ENST00000536513 TLL1O43897 1013 aa8.44□□□□□ -1.06
ABCA4-207ENST00000536513 ERCC2P18074 760 aa8.44□□□□□ -1.06
ABCA4-207ENST00000536513 TPP2P29144 1249 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms