RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 FSTL4Q6MZW2 842 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 TMPRSS12Q86WS5 348 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 ERC1Q8IUD2 1116 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 ELMOD1Q8N336 334 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 ZNF248Q8NDW4 579 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 EXOC4Q96A65 974 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 PCYT2Q99447 389 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 CLSTN3Q9BQT9 956 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 SDF4Q9BRK5 362 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 GPR87Q9BY21 358 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 RSAD1Q9HA92 442 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 CAPN10Q9HC96 672 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 PIN4Q9Y237 131 aaKnown RBP4.36□□□□□ -1.71
YBX3-205ENST00000536107 PCDHB2Q9Y5E7 798 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 MGAQ8IWI9 3026 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 DOCK8Q8NF50 2099 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 PCNX2A6NKB5 2137 aa4.36□□□□□ -1.71
YBX3-205ENST00000536107 MYO5AQ9Y4I1 1855 aaKnown RBP4.35□□□□□ -1.71
YBX3-205ENST00000536107 A0A0G2JNJ9 132 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 A0A1W2PRX2 142 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 ANO9A1A5B4 782 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 AP5Z1O43299 807 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 CBFA2T3O75081 653 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 GNSP15586 552 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 KCNA2P16389 499 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 DRD1P21728 446 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 SFPQP23246 707 aaKnown RBP eCLIP4.35□□□□□ -1.71
YBX3-205ENST00000536107 OR1D2P34982 312 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 ACTR2P61160 394 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 RACK1P63244 317 aaKnown RBP4.35□□□□□ -1.71
YBX3-205ENST00000536107 MAP4K2Q12851 820 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 TARDBPQ13148 414 aaKnown RBP eCLIP4.35□□□□□ -1.71
YBX3-205ENST00000536107 MAPK7Q13164 816 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 MTMR1Q13613 665 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 SART3Q15020 963 aaKnown RBP4.35□□□□□ -1.71
YBX3-205ENST00000536107 IGFBP7Q16270 282 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 ALDH1L2Q3SY69 923 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 FBXO43Q4G163 708 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 TMEM196Q5HYL7 178 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 FAM171A1Q5VUB5 890 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 FAM160B1Q5W0V3 765 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 EFCAB12Q6NXP0 572 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 HOMER1Q86YM7 354 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 COLGALT2Q8IYK4 626 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 GPR65Q8IYL9 337 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 CLASRPQ8N2M8 674 aaKnown RBP4.35□□□□□ -1.71
YBX3-205ENST00000536107 SAMD3Q8N6K7 520 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 FRMD1Q8N878 549 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 SSH3Q8TE77 659 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 CUL5Q93034 780 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 CNOT6LQ96LI5 555 aaKnown RBP4.35□□□□□ -1.71
YBX3-205ENST00000536107 FNBP1Q96RU3 617 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.35□□□□□ -1.71
YBX3-205ENST00000536107 GCOM2Q9BZD3 368 aaPredicted RBP4.35□□□□□ -1.71
YBX3-205ENST00000536107 LRRCC1Q9C099 1032 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 GZF1Q9H116 711 aaPredicted RBP4.35□□□□□ -1.71
YBX3-205ENST00000536107 JMJD4Q9H9V9 463 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 THG1LQ9NWX6 298 aaKnown RBP4.35□□□□□ -1.71
YBX3-205ENST00000536107 GALNT8Q9NY28 637 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 SLC9A2Q9UBY0 812 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 Q9UFV3 132 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.35□□□□□ -1.71
YBX3-205ENST00000536107 FLNCQ14315 2725 aa4.35□□□□□ -1.71
YBX3-205ENST00000536107 UTP20O75691 2785 aaKnown RBP4.35□□□□□ -1.71
YBX3-205ENST00000536107 LOXHD1Q8IVV2 1947 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 GREB1LQ9C091 1923 aaPredicted RBP4.34□□□□□ -1.71
YBX3-205ENST00000536107 BAZ2AQ9UIF9 1905 aaKnown RBP4.34□□□□□ -1.71
YBX3-205ENST00000536107 USP9YO00507 2555 aaPredicted RBP4.34□□□□□ -1.71
YBX3-205ENST00000536107 A1L4Q6 167 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 MAGEB2O15479 319 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 ADAM12O43184 909 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 TNFSF14O43557 240 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 AGFG2O95081 481 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 C22orf31O95567 290 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 PARP1P09874 1014 aaKnown RBP4.34□□□□□ -1.71
YBX3-205ENST00000536107 SNHG28P0DPA3 235 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 NR4A1P22736 598 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 U2AF2P26368 475 aaKnown RBP eCLIP4.34□□□□□ -1.714e-11■■■□□ 14.9
YBX3-205ENST00000536107 SLC26A2P50443 739 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 ARPP19P56211 112 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 CLDN6P56747 220 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 FANCCQ00597 558 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 FCHO2Q0JRZ9 810 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 MYO1EQ12965 1108 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 TRAF1Q13077 416 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 TEAD2Q15562 447 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 TBC1D25Q3MII6 688 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 SPDYCQ5MJ68 293 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 HTR3DQ70Z44 454 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 RTL10Q7L3V2 364 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 CATSPER4Q7RTX7 472 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 TMC8Q8IU68 726 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 RNF168Q8IYW5 571 aaPredicted RBP4.34□□□□□ -1.71
YBX3-205ENST00000536107 LRRC71Q8N4P6 559 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 EXD3Q8N9H8 876 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 MDGA1Q8NFP4 955 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 LNX1Q8TBB1 728 aaPredicted RBP4.34□□□□□ -1.71
YBX3-205ENST00000536107 HASPINQ8TF76 798 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 KCNE4Q8WWG9 221 aa4.34□□□□□ -1.71
YBX3-205ENST00000536107 APPBP2Q92624 585 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms