RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 GTSE1Q9NYZ3 720 aa16.07■□□□□ 0.16
CNN1-202ENST00000535659 CWC15Q9P013 229 aaKnown RBP16.07■□□□□ 0.16
CNN1-202ENST00000535659 MARK1Q9P0L2 795 aa16.07■□□□□ 0.16
CNN1-202ENST00000535659 TYW5A2RUC4 315 aaKnown RBP16.06■□□□□ 0.16
CNN1-202ENST00000535659 LRRD1A4D1F6 860 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 PI4K2BG5E9Z4 385 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 H3BRJ5 948 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 DDX3YO15523 660 aaKnown RBP16.06■□□□□ 0.16
CNN1-202ENST00000535659 DAPK3O43293 454 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 TBL1XO60907 577 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 PENKP01210 267 aaPredicted RBP16.06■□□□□ 0.16
CNN1-202ENST00000535659 KRT1P04264 644 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 CD48P09326 243 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 SRFP11831 508 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 GOT1P17174 413 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 EPHB2P29323 1055 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 ARL4AP40617 200 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 TTC39BQ5VTQ0 682 aaPredicted RBP16.06■□□□□ 0.16
CNN1-202ENST00000535659 RWDD4Q6NW29 188 aaKnown RBP16.06■□□□□ 0.16
CNN1-202ENST00000535659 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 EXD1Q8NHP7 514 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 TTC8Q8TAM2 541 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 TSC1Q92574 1164 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 RNF25Q96BH1 459 aaPredicted RBP16.06■□□□□ 0.16
CNN1-202ENST00000535659 TBC1D31Q96DN5 1066 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 P2RY11Q96G91 374 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 PRICKLE1Q96MT3 831 aaPredicted RBP16.06■□□□□ 0.16
CNN1-202ENST00000535659 CALN1Q9BXU9 219 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 ZYG11BQ9C0D3 744 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 RETREG1Q9H6L5 497 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 PLK2Q9NYY3 685 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 MPP6Q9NZW5 540 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 RCOR3Q9P2K3 495 aaPredicted RBP16.06■□□□□ 0.16
CNN1-202ENST00000535659 SORCS3Q9UPU3 1222 aa16.06■□□□□ 0.16
CNN1-202ENST00000535659 C3orf70A6NLC5 250 aaPredicted RBP16.05■□□□□ 0.16
CNN1-202ENST00000535659 NEDD8-MDP1E9PL57 170 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 NARSO43776 548 aaKnown RBP16.05■□□□□ 0.16
CNN1-202ENST00000535659 CNTN5O94779 1100 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 ADH5P11766 374 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 TYRP14679 529 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 RHOQP17081 205 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 CDH4P55283 916 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 TPI1P60174 286 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 PFKPQ01813 784 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 DPYSL3Q14195 570 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 ALFQ53S48 1182 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 RFX8Q6ZV50 586 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 VSIG1Q86XK7 387 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 ALG3Q92685 438 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 BHMTQ93088 406 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 TLR10Q9BXR5 811 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 SLC2A4RGQ9NR83 387 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 MUC3AQ02505 3323 aa16.05■□□□□ 0.16
CNN1-202ENST00000535659 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 ENC1O14682 589 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 HOXC11O43248 304 aaPredicted RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 CLDN11O75508 207 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 HOXD9P28356 352 aaPredicted RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 HOXC13P31276 330 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 GJA4P35212 333 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 IRAK1P51617 712 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 MMRN1Q13201 1228 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 ZNF177Q13360 481 aaPredicted RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 ANKRD20A8PQ5CZ79 823 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 MFSD7Q6UXD7 560 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 CHST9Q7L1S5 443 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 DNASE1L2Q92874 299 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 RBM41Q96IZ5 413 aaKnown RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 CSPG4P5Q96PW8 444 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 XPO6Q96QU8 1125 aaKnown RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 ZNF670Q9BS34 389 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 CATSPERBQ9H7T0 1116 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 CD320Q9NPF0 282 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 DUSP12Q9UNI6 340 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 NEU3Q9UQ49 428 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 KIF26AQ9ULI4 1882 aaPredicted RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 MYO10Q9HD67 2058 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 A0A1B0GVM2 712 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 TCAF2A6NFQ2 919 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 ZNF487B1APH4 448 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 FGF10O15520 208 aaPredicted RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 PYGMP11217 842 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 AMPD1P23109 780 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 DNA2P51530 1060 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 COPS2P61201 443 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 ETF1P62495 437 aaKnown RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 AMPD2Q01433 879 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 GAB4Q2WGN9 574 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 RNF43Q68DV7 783 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 CIR1Q86X95 450 aaPredicted RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 CCDC117Q8IWD4 279 aaPredicted RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 CARNMT1Q8N4J0 409 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 NAT16Q8N8M0 369 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 RNF157Q96PX1 679 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 WDR24Q96S15 920 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 MAK16Q9BXY0 300 aaKnown RBP16.04■□□□□ 0.16
CNN1-202ENST00000535659 SLC2A11Q9BYW1 496 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 FBXO10Q9UK96 956 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 CLEC4EQ9ULY5 219 aa16.04■□□□□ 0.16
CNN1-202ENST00000535659 TCF20Q9UGU0 1960 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms