RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 DYNLL1P63167 89 aaKnown RBP6.86□□□□□ -1.31
USP28-202ENST00000535607 DSG1Q02413 1049 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 FAPQ12884 760 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 RASA2Q15283 850 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 EPHA7Q15375 998 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 TBCCQ15814 346 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 NFIL3Q16649 462 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 PDK4Q16654 411 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 MLANAQ16655 118 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 TBC1D25Q3MII6 688 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 DCAF17Q5H9S7 520 aaPredicted RBP6.86□□□□□ -1.31
USP28-202ENST00000535607 C12orf60Q5U649 245 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 CPZQ66K79 652 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 OR52E8Q6IFG1 317 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 KLC3Q6P597 504 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 CENPUQ71F23 418 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 MIGA2Q7L4E1 593 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 OTOP1Q7RTM1 612 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 TRIM74Q86UV6 250 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 TRIM73Q86UV7 250 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 GPBP1Q86WP2 473 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 ZZZ3Q8IYH5 903 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 EFHBQ8N7U6 833 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 KIAA1958Q8N8K9 716 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 CCDC89Q8N998 374 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 SLC30A5Q8TAD4 765 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 GDAP1Q8TB36 358 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 TGFBRAP1Q8WUH2 860 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 CHTF18Q8WVB6 975 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 IRGQQ8WZA9 623 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 HPS3Q969F9 1004 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 PPP2R3CQ969Q6 453 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 NSL1Q96IY1 281 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 FAM81BQ96LP2 452 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 SYT15Q9BQS2 421 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 BTBD10Q9BSF8 475 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 CDC42EP4Q9H3Q1 356 aaKnown RBP6.86□□□□□ -1.31
USP28-202ENST00000535607 Q9H521 79 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 ZNF552Q9H707 407 aaPredicted RBP6.86□□□□□ -1.31
USP28-202ENST00000535607 ADARB2Q9NS39 739 aaKnown RBP6.86□□□□□ -1.31
USP28-202ENST00000535607 OXSMQ9NWU1 459 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 MCM9Q9NXL9 1143 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 DDX43Q9NXZ2 648 aaKnown RBP6.86□□□□□ -1.31
USP28-202ENST00000535607 DTLQ9NZJ0 730 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 GCNT4Q9P109 453 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 ARHGAP28Q9P2N2 729 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 STX18Q9P2W9 335 aaKnown RBP6.86□□□□□ -1.31
USP28-202ENST00000535607 MAD2L2Q9UI95 211 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 HAO1Q9UJM8 370 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 ANAPC5Q9UJX4 755 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 PCDHA12Q9UN75 941 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 FRMD4BQ9Y2L6 1034 aa6.86□□□□□ -1.31
USP28-202ENST00000535607 SIPA1L1O43166 1804 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 UMODL1Q5DID0 1318 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 A8MUI8 341 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 RASA4BC9J798 803 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 BTBD19C9JJ37 291 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 DDX3XO00571 662 aaKnown RBP eCLIP6.85□□□□□ -1.31
USP28-202ENST00000535607 RASA4O43374 803 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 SPOPO43791 374 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 STRNO43815 780 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 MTA2O94776 668 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 HAUS5O94927 633 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 PSMG1O95456 288 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 CYP17A1P05093 508 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 NCAM1P13591 858 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 TAC1P20366 129 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 MUTP22033 750 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 PMLP29590 882 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 VIPR1P32241 457 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 PHBP35232 272 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 EPHA5P54756 1037 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 YBX1P67809 324 aaKnown RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 ZBTB16Q05516 673 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 SNX1Q13596 522 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 PTK6Q13882 451 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 KRT72Q14CN4 511 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 RCN1Q15293 331 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 LRRC41Q15345 812 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 KYNUQ16719 465 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 LONRF1Q17RB8 773 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 TRMT5Q32P41 509 aaKnown RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 DNAL1Q4LDG9 190 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 PAN2Q504Q3 1202 aaKnown RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 FAM47AQ5JRC9 791 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 PPP1R2P3Q6NXS1 205 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 VSTM1Q6UX27 236 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 CD300LDQ6UXZ3 194 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 C4orf50Q6ZRC1 276 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 RNF207Q6ZRF8 634 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 FAM43BQ6ZT52 329 aaPredicted RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 USP50Q70EL3 339 aaPredicted RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 OTUD6AQ7L8S5 288 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 NET1Q7Z628 596 aaPredicted RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 STRA8Q7Z7C7 330 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 TDRPQ86YL5 185 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 SLC13A5Q86YT5 568 aaPredicted RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 FAM126BQ8IXS8 530 aa6.85□□□□□ -1.31
USP28-202ENST00000535607 SRRM1Q8IYB3 904 aaKnown RBP6.85□□□□□ -1.31
USP28-202ENST00000535607 SYT2Q8N9I0 419 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms