RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 DLG4P78352 724 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 CYP20A1Q6UW02 462 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 NPNTQ6UXI9 565 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 RIBC1Q8N443 379 aaPredicted RBP12.89□□□□□ -0.35
SPG11-203ENST00000535302 NETO2Q8NC67 525 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 CXorf56Q9H5V9 222 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 ACP6Q9NPH0 428 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 CRYL1Q9Y2S2 319 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 TRIM24O15164 1050 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 GAS2O43903 313 aaKnown RBP12.89□□□□□ -0.35
SPG11-203ENST00000535302 PROSCO94903 275 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 SLITRK3O94933 977 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 CRTAMO95727 393 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 HNF4AP41235 474 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 EIF2B2P49770 351 aaKnown RBP12.89□□□□□ -0.35
SPG11-203ENST00000535302 TRIQKQ629K1 86 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 MIR1-1HGQ9H1L0 117 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 TMBIM4Q9HC24 238 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 NOD2Q9HC29 1040 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 KCNK1O00180 336 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 EML1O00423 815 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 INPP4BO15327 924 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 PSMA3P25788 255 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 CCR1P32246 355 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 MILR1Q7Z6M3 343 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 PIGKQ92643 395 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 GMCL1Q96IK5 515 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 DGCR6LQ9BY27 220 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 ACTR8Q9H981 624 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 PTPRMP28827 1452 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 ETS1P14921 441 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 VCLP18206 1134 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 FMO4P31512 558 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 BTG3Q14201 252 aaPredicted RBP12.89□□□□□ -0.35
SPG11-203ENST00000535302 CCDC185Q8N715 623 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 MAGEB18Q96M61 343 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 TMEM237Q96Q45 408 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 ATP13A1Q9HD20 1204 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 HES2Q9Y543 173 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 CCND1P24385 295 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 SNAP47Q5SQN1 464 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 SCUBE1Q8IWY4 988 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 UCMAQ8WVF2 138 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 FAM120BQ96EK7 910 aaKnown RBP12.89□□□□□ -0.35
SPG11-203ENST00000535302 CNPY3Q9BT09 278 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 UBXN6Q9BZV1 441 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 XPNPEP3Q9NQH7 507 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 KBTBD4Q9NVX7 518 aa12.89□□□□□ -0.35
SPG11-203ENST00000535302 LRRC14BA6NHZ5 514 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 VIL1P09327 827 aaKnown RBP12.88□□□□□ -0.35
SPG11-203ENST00000535302 FNDC3BQ53EP0 1204 aaKnown RBP12.88□□□□□ -0.35
SPG11-203ENST00000535302 ANKRD7Q92527 254 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 BBS4Q96RK4 519 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 CAMKK2Q96RR4 588 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 GRIP2Q9C0E4 1043 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 CTNNAL1Q9UBT7 734 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 SMIM31A0A1B0GVY4 71 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 IFRD1O00458 451 aaPredicted RBP12.88□□□□□ -0.35
SPG11-203ENST00000535302 CRADDP78560 199 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 MPP3Q13368 585 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 DDR2Q16832 855 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 TBCELQ5QJ74 424 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 N4BP2L1Q5TBK1 243 aaPredicted RBP12.88□□□□□ -0.35
SPG11-203ENST00000535302 TMEM26Q6ZUK4 368 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 NYAP1Q6ZVC0 841 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 C4orf19Q8IY42 314 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 FNDC5Q8NAU1 212 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 PCSK9Q8NBP7 692 aaKnown RBP12.88□□□□□ -0.35
SPG11-203ENST00000535302 SLC9A7Q96T83 725 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 TCRBV5S4A2TA0A5A2 114 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 WNT10BO00744 389 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 KRT33AO76009 404 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 CPA3P15088 417 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 RHAGQ02094 409 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 MCOLN2Q8IZK6 566 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 ARRDC4Q8NCT1 418 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 APBA2Q99767 749 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 SEMA4AQ9H3S1 761 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 ELOVL6Q9H5J4 265 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 MRPS7Q9Y2R9 242 aaKnown RBP12.88□□□□□ -0.35
SPG11-203ENST00000535302 LOC100506127A0A0U1RQW1 187 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 TALDO1P37837 337 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 VHLP40337 213 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 ELK3P41970 407 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 BRSK2Q8IWQ3 736 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 POU5F2Q8N7G0 328 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 ACTL9Q8TC94 416 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 TP53INP1Q96A56 240 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 MPP4Q96JB8 637 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
SPG11-203ENST00000535302 STON1Q9Y6Q2 735 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 SSTR1P30872 391 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 ARMC4Q5T2S8 1044 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 C4orf22Q6V702 233 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 DEFB106AQ8N104 65 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 ADGRE3Q9BY15 652 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 LIMD1Q9UGP4 676 aa12.88□□□□□ -0.35
SPG11-203ENST00000535302 CNOT3O75175 753 aaKnown RBP12.88□□□□□ -0.35
SPG11-203ENST00000535302 SCGNO76038 276 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms