RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ABCA6Q8N139 1617 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 ZBTB14O43829 449 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 ELK3P41970 407 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 SLC6A3Q01959 620 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 PRMT9Q6P2P2 845 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 VTI1BQ9UEU0 232 aa18.54■□□□□ 0.56
SFSWAP-203ENST00000535236 ENO4A6NNW6 628 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 THOP1P52888 689 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 DDHD1Q8NEL9 900 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 SETBP1Q9Y6X0 1596 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 H3BMM5 538 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 PARNO95453 639 aaKnown RBP18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 BDNFP23560 247 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 IQSEC1Q6DN90 963 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 RGL4Q8IZJ4 473 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 METTL6Q8TCB7 284 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 ZDHHC6Q9H6R6 413 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 PTPRHQ9HD43 1115 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 HACD1B0YJ81 288 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 VAPBO95292 243 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 CCDC130P13994 396 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 SERPINA4P29622 427 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 CLK2P49760 499 aaKnown RBP18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 ERVK-9P63128 1117 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 PABPC1LQ4VXU2 614 aaKnown RBP18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 ZCWPW2Q504Y3 356 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 USP45Q70EL2 814 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 BNIPLQ7Z465 357 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 TMEM86AQ8N2M4 240 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 LENG9Q96B70 501 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 CDCA5Q96FF9 252 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 POPDC2Q9HBU9 364 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 CARNS1A5YM72 827 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 PRKAA2P54646 552 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 TPGS1Q6ZTW0 290 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 ARHGEF19Q8IW93 802 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 BRSK2Q8IWQ3 736 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 TERB1Q8NA31 727 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 NSMCE2Q96MF7 247 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 ADAM2Q99965 735 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 TMEM51Q9NW97 253 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 ZMYM5Q9UJ78 669 aa18.53■□□□□ 0.56
SFSWAP-203ENST00000535236 FAM20BO75063 409 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 LTFP02788 710 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 CYP1A1P04798 512 aaPredicted RBP18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 USP17L7P0C7H9 530 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 FLT3P36888 993 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 ADCYAP1R1P41586 468 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 GATAD2AQ86YP4 633 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 GPC2Q8N158 579 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 KYQ8NBH2 561 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 MAGEC3Q8TD91 643 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 ERLEC1Q96DZ1 483 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 TPD52L3Q96J77 140 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 SEPHS2Q99611 448 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 EVA1BQ9NVM1 165 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 NDUFAF1Q9Y375 327 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 MROH7Q68CQ1 1323 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 TBC1D3BA6NDS4 549 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 SMIM22K7EJ46 135 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 BTN3A1O00481 513 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 HPCAL1P37235 193 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 MMP13P45452 471 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 RXRGP48443 463 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 ST13P50502 369 aaKnown RBP18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 PPATQ06203 517 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 KLHL4Q9C0H6 718 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 TKTL2Q9H0I9 626 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 SERHL2Q9H4I8 314 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 SERHLQ9NQF3 203 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 ADPRHL2Q9NX46 363 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 PCDHGA4Q9Y5G9 962 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 CCDC154A6NI56 674 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 ATG7O95352 703 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 SERPINE1P05121 402 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 UMPSP11172 480 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 FMO4P31512 558 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 MAGEA10P43363 369 aaPredicted RBP18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 DDR2Q16832 855 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 VCPIP1Q96JH7 1222 aa18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 MRPL17Q9NRX2 175 aaKnown RBP18.52■□□□□ 0.56
SFSWAP-203ENST00000535236 SAC3D1A6NKF1 404 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 A8MX80 341 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 PIK3CGP48736 1102 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 GCNT1Q02742 428 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 ADGRA1Q86SQ6 560 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 SLC5A5Q92911 643 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 OMDQ99983 421 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 PIH1D1Q9NWS0 290 aaKnown RBP18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 ENTPD4Q9Y227 616 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 CRYL1Q9Y2S2 319 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 FASP25445 335 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 PAPD7Q5XG87 772 aaKnown RBP18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 CES5AQ6NT32 575 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 TRAPPC5Q8IUR0 188 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 ZNF655Q8N720 491 aaPredicted RBP18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 C19orf18Q8NEA5 215 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 ABCC13Q9NSE7 274 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 ARHGAP28Q9P2N2 729 aa18.52■□□□□ 0.55
SFSWAP-203ENST00000535236 KLHL3Q9UH77 587 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms