RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 KRT9P35527 623 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 PITX1P78337 314 aaPredicted RBP9.22□□□□□ -0.93
COPB1-211ENST00000534234 CDK17Q00537 523 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 GRIK2Q13002 908 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 EIF4EBP2Q13542 120 aaPredicted RBP9.22□□□□□ -0.93
COPB1-211ENST00000534234 HNRNPA1L2Q32P51 320 aaKnown RBP9.22□□□□□ -0.93
COPB1-211ENST00000534234 PITRM1Q5JRX3 1037 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 RAP1GAP2Q684P5 730 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 CHSY1Q86X52 802 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 PASD1Q8IV76 773 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 DEFB106AQ8N104 65 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 ATP6V0D2Q8N8Y2 350 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 C1orf216Q8TAB5 229 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 MYO19Q96H55 970 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 MRGPRX3Q96LB0 322 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 NOX5Q96PH1 765 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 CPXM1Q96SM3 734 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 SCNM1Q9BWG6 230 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 BTBD1Q9H0C5 482 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 CLSTN2Q9H4D0 955 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 C6orf106Q9H6K1 298 aaPredicted RBP9.22□□□□□ -0.93
COPB1-211ENST00000534234 SIX2Q9NPC8 291 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 PCDHGC3Q9UN70 934 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 ERVW-1Q9UQF0 538 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 EPG5Q9HCE0 2579 aa9.22□□□□□ -0.93
COPB1-211ENST00000534234 CNOT1A5YKK6 2376 aaKnown RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 TPRP12270 2363 aaKnown RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 SYNJ2BP-COX16A0A087WUM0 186 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 F5H5T6 163 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 RNASEH1O60930 286 aaKnown RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 GRAP2O75791 330 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 SEMA4FO95754 770 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 SLC2A3P11169 496 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 PRKCSHP14314 528 aaPredicted RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 ABCB4P21439 1286 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 CCR1P32246 355 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 RDXP35241 583 aaKnown RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 CLCN1P35523 988 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 CSNK1EP49674 416 aaKnown RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 SNX16P57768 344 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 FAM193AP78312 1265 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 HNRNPDQ14103 355 aaKnown RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 MAN2A1Q16706 1144 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 TTC31Q49AM3 519 aaPredicted RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 VWA3BQ502W6 1294 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 HSP90AA4PQ58FG1 418 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 ZNF776Q68DI1 518 aaPredicted RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 SMYD5Q6GMV2 418 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 OR6B2Q6IFH4 312 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 C11orf57Q6ZUT1 292 aaPredicted RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 SLC47A2Q86VL8 602 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 FAM114A1Q8IWE2 563 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 DHX40Q8IX18 779 aaKnown RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 KDM1BQ8NB78 822 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 GANCQ8TET4 914 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 SNX19Q92543 992 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 RNF34Q969K3 372 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 CAMK1GQ96NX5 476 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 RSPH9Q9H1X1 276 aaPredicted RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 NDST4Q9H3R1 872 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 GAREM1Q9H706 876 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 FAM204AQ9H8W3 233 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 DDIT4Q9NX09 232 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 COX16Q9P0S2 106 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 SLCO3A1Q9UIG8 710 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 NCKAP1Q9Y2A7 1128 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.21□□□□□ -0.93
COPB1-211ENST00000534234 CEP83Q9Y592 693 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 PCDHB9Q9Y5E1 797 aa9.21□□□□□ -0.93
COPB1-211ENST00000534234 TARSL2A2RTX5 802 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 TTC34A8MYJ7 566 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 C1QTNF9BB2RNN3 333 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 HSF2BPO75031 334 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 SIN3BO75182 1162 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 FSBPO95073 299 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 PROS1P07225 676 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 SRPRAP08240 638 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 C1QTNF9P0C862 333 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 PNMA6AP0CW24 399 aaPredicted RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 ERCC5P28715 1186 aaPredicted RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 CTSOP43234 321 aaPredicted RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 AFF3P51826 1226 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 BPIFB4P59827 614 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 ECT2LQ008S8 904 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 SLC6A3Q01959 620 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 SFSWAPQ12872 951 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 ARID5BQ14865 1188 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 TRIP6Q15654 476 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 HLA-BQ31612 363 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 DPCR1Q3MIW9 517 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 C9orf64Q5T6V5 341 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 RNF219Q5W0B1 726 aaPredicted RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 USP30Q70CQ3 517 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 APCDD1Q8J025 514 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 CCAR2Q8N163 923 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 C1orf131Q8NDD1 294 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 BIRC7Q96CA5 298 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 RPL10LQ96L21 214 aaKnown RBP9.2□□□□□ -0.94
COPB1-211ENST00000534234 SLC2A13Q96QE2 648 aa9.2□□□□□ -0.94
COPB1-211ENST00000534234 PRMT1Q99873 361 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms