RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 I6L893 689 aaPredicted RBP20.45■□□□□ 0.86
CHEK1-215ENST00000533778 NPC1O15118 1278 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 CLDN11O75508 207 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 LCA5LO95447 670 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 PCK1P35558 622 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 MAGEA1P43355 309 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 CXCL12P48061 93 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 CDH4P55283 916 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 MESP2Q0VG99 397 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 ZNF177Q13360 481 aaPredicted RBP20.45■□□□□ 0.86
CHEK1-215ENST00000533778 RAB6CQ53S08 254 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 C2orf27AQ580R0 203 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 CHST9Q7L1S5 443 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 C14orf80Q86SX3 495 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 RHOT2Q8IXI1 618 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 AHI1Q8N157 1196 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 CCDC185Q8N715 623 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.45■□□□□ 0.86
CHEK1-215ENST00000533778 RPLP0P6Q8NHW5 317 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 ZNF564Q8TBZ8 553 aaPredicted RBP20.45■□□□□ 0.86
CHEK1-215ENST00000533778 IGSF8Q969P0 613 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 PACSIN1Q9BY11 444 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 TRIM7Q9C029 511 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 RAB6CQ9H0N0 254 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 RETREG1Q9H6L5 497 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 PPARGC1AQ9UBK2 798 aaKnown RBP20.45■□□□□ 0.86
CHEK1-215ENST00000533778 GGA2Q9UJY4 613 aa20.45■□□□□ 0.86
CHEK1-215ENST00000533778 EIF3CLB5ME19 914 aaKnown RBP20.44■□□□□ 0.86
CHEK1-215ENST00000533778 PRPSAP2O60256 369 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 SRGAP2O75044 1071 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 MOCS3O95396 460 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 PABPC1P11940 636 aaKnown RBP20.44■□□□□ 0.86
CHEK1-215ENST00000533778 HLA-FP30511 346 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 KIR2DL1P43626 348 aaPredicted RBP20.44■□□□□ 0.86
CHEK1-215ENST00000533778 ZNF252P-AS1Q0IIN9 211 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 SLC12A1Q13621 1099 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 GAS6Q14393 721 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 DMC1Q14565 340 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 GEN1Q17RS7 908 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 SDE2Q6IQ49 451 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 ZNF683Q8IZ20 524 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 CCAR2Q8N163 923 aaKnown RBP20.44■□□□□ 0.86
CHEK1-215ENST00000533778 NIPA2Q8N8Q9 360 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 EIF3CQ99613 913 aaKnown RBP20.44■□□□□ 0.86
CHEK1-215ENST00000533778 IRF2BPLQ9H1B7 796 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 TMPRSS4Q9NRS4 437 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 ABCB8Q9NUT2 735 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 FZD10Q9ULW2 581 aa20.44■□□□□ 0.86
CHEK1-215ENST00000533778 EPN1Q9Y6I3 576 aaPredicted RBP20.44■□□□□ 0.86
CHEK1-215ENST00000533778 IGLV3-10A0A075B6K4 115 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 PRRT4C9JH25 899 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 L1CAMP32004 1257 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 TIE1P35590 1138 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 GGCXP38435 758 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 EOGTQ5NDL2 527 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 SYT13Q7L8C5 426 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 KIAA0907Q7Z7F0 614 aaPredicted RBP20.43■□□□□ 0.86
CHEK1-215ENST00000533778 PSTKQ8IV42 348 aaKnown RBP20.43■□□□□ 0.86
CHEK1-215ENST00000533778 ZNF513Q8N8E2 541 aaPredicted RBP20.43■□□□□ 0.86
CHEK1-215ENST00000533778 CIPCQ9C0C6 399 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 ZYG11BQ9C0D3 744 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 ELOVL2Q9NXB9 296 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 FBXO4Q9UKT5 387 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 SLC8A2Q9UPR5 921 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 PCDHA13Q9Y5I0 950 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 SNX10Q9Y5X0 201 aa20.43■□□□□ 0.86
CHEK1-215ENST00000533778 SOWAHDA6NJG2 315 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 NDUFA10O95299 355 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 PAPSS2O95340 614 aaPredicted RBP20.42■□□□□ 0.86
CHEK1-215ENST00000533778 ATP5BP06576 529 aaKnown RBP20.42■□□□□ 0.86
CHEK1-215ENST00000533778 HNRNPLP14866 589 aaKnown RBP eCLIP20.42■□□□□ 0.86
CHEK1-215ENST00000533778 POLR2EP19388 210 aaKnown RBP20.42■□□□□ 0.86
CHEK1-215ENST00000533778 MIPP30301 263 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 LMAN2Q12907 356 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 ANGPT1Q15389 498 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 BOLA3Q53S33 107 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 ERMARDQ5T6L9 678 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 SFTPA1Q8IWL2 248 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 SLC35G2Q8TBE7 412 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 RFFLQ8WZ73 363 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 PRMT8Q9NR22 394 aaPredicted RBP20.42■□□□□ 0.86
CHEK1-215ENST00000533778 PCSK1NQ9UHG2 260 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 USP18Q9UMW8 372 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 PLA2G4CQ9UP65 541 aa20.42■□□□□ 0.86
CHEK1-215ENST00000533778 LRCH4O75427 683 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 KLF8O95600 359 aaPredicted RBP20.41■□□□□ 0.86
CHEK1-215ENST00000533778 CD70P32970 193 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 HTR7P34969 479 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 ARHGAP25P42331 645 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 MRE11P49959 708 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 TCEAL1Q15170 157 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 FSCBQ5H9T9 825 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 C6orf118Q5T5N4 469 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 EMC10Q5UCC4 262 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 RWDD4Q6NW29 188 aaKnown RBP20.41■□□□□ 0.86
CHEK1-215ENST00000533778 SETD3Q86TU7 594 aaPredicted RBP20.41■□□□□ 0.86
CHEK1-215ENST00000533778 CIR1Q86X95 450 aaPredicted RBP20.41■□□□□ 0.86
CHEK1-215ENST00000533778 CHPFQ8IZ52 775 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 ALLCQ8N6M5 410 aa20.41■□□□□ 0.86
CHEK1-215ENST00000533778 ARFGAP1Q8N6T3 406 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms