RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 IGLV3-25P01717 112 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 GLI1P08151 1106 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 SLC2A3P11169 496 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 UCHL3P15374 230 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 CYP11B1P15538 503 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 ENGP17813 658 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 CCR1P32246 355 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 GGCXP38435 758 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 KLK7P49862 253 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 NOVA1P51513 510 aaKnown RBP10.8□□□□□ -0.68
CAPN1-225ENST00000533704 COPAP53621 1224 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 SLC6A3Q01959 620 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 GFPT1Q06210 699 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-225ENST00000533704 CAMK2GQ13555 558 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-225ENST00000533704 PTPRNQ16849 979 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 DUOXA1Q1HG43 343 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 C2CD6Q53TS8 623 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 FSCBQ5H9T9 825 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 PITRM1Q5JRX3 1037 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 FKBP15Q5T1M5 1219 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 PSAPL1Q6NUJ1 521 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 DPY19L2P1Q6NXN4 242 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 OLFML1Q6UWY5 402 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 KIAA0907Q7Z7F0 614 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-225ENST00000533704 ERICH1Q86X53 443 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 SNX19Q92543 992 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 TMEM245Q9H330 911 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 NLRC4Q9NPP4 1024 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 ITM2CQ9NQX7 267 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 FAM207AQ9NSI2 230 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-225ENST00000533704 ANO10Q9NW15 660 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 FANCLQ9NW38 375 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 ASNSD1Q9NWL6 643 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 WSB2Q9NYS7 404 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-225ENST00000533704 USP36Q9P275 1121 aaKnown RBP10.8□□□□□ -0.68
CAPN1-225ENST00000533704 EVLQ9UI08 416 aaPredicted RBP10.8□□□□□ -0.68
CAPN1-225ENST00000533704 SLC6A14Q9UN76 642 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 TMEM131Q92545 1883 aa10.8□□□□□ -0.68
CAPN1-225ENST00000533704 DOCK4Q8N1I0 1966 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 ACACBO00763 2458 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 M0QYT0 321 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 CDX4O14627 284 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 TM4SF5O14894 197 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 GFPT2O94808 682 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 KCNK5O95279 499 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 ADRB1P08588 477 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 PDGFRAP16234 1089 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 OXTRP30559 389 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 CTSOP43234 321 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 SULT1E1P49888 294 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 POLR2FP61218 127 aaKnown RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 CENPCQ03188 943 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 STX1AQ16623 288 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 PLEKHG6Q3KR16 790 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 WDR45BQ5MNZ6 344 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 RABGAP1LQ5R372 815 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 FAM102AQ5T9C2 384 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 NAA35Q5VZE5 725 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 RNF219Q5W0B1 726 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 SLC23A3Q6PIS1 610 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 SLC26A9Q7LBE3 791 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 RABEPKQ7Z6M1 372 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 NOP9Q86U38 636 aaKnown RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 METTL3Q86U44 580 aaKnown RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 DHX40Q8IX18 779 aaKnown RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 ZCCHC9Q8N567 271 aaKnown RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 ANKRD20A12PQ8NF67 263 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 OR2I1PQ8NGU4 316 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 CEP76Q8TAP6 659 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 GANCQ8TET4 914 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 FOXJ1Q92949 421 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 ZNF419Q96HQ0 510 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 RPRD1AQ96P16 312 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 NUP58Q9BVL2 599 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 NAA15Q9BXJ9 866 aaKnown RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 SIK2Q9H0K1 926 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 PRSS16Q9NQE7 514 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 KIAA1522Q9P206 1035 aaPredicted RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 SUN2Q9UH99 717 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 INTS6Q9UL03 887 aaKnown RBP10.79□□□□□ -0.68
CAPN1-225ENST00000533704 VANGL2Q9ULK5 521 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 ERVW-1Q9UQF0 538 aa10.79□□□□□ -0.68
CAPN1-225ENST00000533704 PLXNA2O75051 1894 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 CHD8Q9HCK8 2581 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 F8VZ95 297 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 GIPC1O14908 333 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 DNTTP04053 509 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 ASLP04424 464 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 MMEP08473 750 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 SERPINF2P08697 491 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 GNSP15586 552 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 CDK11BP21127 795 aaKnown RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 NOS2P35228 1153 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 HOXD12P35452 270 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 COPB1P53618 953 aaKnown RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 RPS14P62263 151 aaKnown RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 MYL5Q02045 173 aa10.78□□□□□ -0.68
CAPN1-225ENST00000533704 AUHQ13825 339 aaKnown RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 N4BP2L1Q5TBK1 243 aaPredicted RBP10.78□□□□□ -0.68
CAPN1-225ENST00000533704 SH3PXD2AQ5TCZ1 1133 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms