RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ZYG11BQ9C0D3 744 aa18■□□□□ 0.47
NXF1-216ENST00000533499 TRPV5Q9NQA5 729 aa18■□□□□ 0.47
NXF1-216ENST00000533499 MARK1Q9P0L2 795 aa18■□□□□ 0.47
NXF1-216ENST00000533499 DEC1Q9P2X7 70 aa18■□□□□ 0.47
NXF1-216ENST00000533499 MIA3Q5JRA6 1907 aa18■□□□□ 0.47
NXF1-216ENST00000533499 UNC80Q8N2C7 3258 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 USP27XA6NNY8 438 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 TRIM24O15164 1050 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 TULP3O75386 442 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 PENKP01210 267 aaPredicted RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 GOT1P17174 413 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 HOXD9P28356 352 aaPredicted RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 ZNF177Q13360 481 aaPredicted RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 PON2Q15165 354 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 ALFQ53S48 1182 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 TTC39BQ5VTQ0 682 aaPredicted RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 RALGPS2Q86X27 583 aaPredicted RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 PSTKQ8IV42 348 aaKnown RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 REXO1L1PQ8IX06 675 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 CCAR2Q8N163 923 aaKnown RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 C17orf53Q8N3J3 647 aaPredicted RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 RNF25Q96BH1 459 aaPredicted RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 CHFRQ96EP1 664 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 P2RY11Q96G91 374 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 P2RY13Q9BPV8 354 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 IRX2Q9BZI1 471 aaPredicted RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 MFSD1Q9H3U5 465 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 PCDH18Q9HCL0 1135 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 ARHGEF4Q9NR80 690 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 WNT16Q9UBV4 365 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 CLEC4EQ9ULY5 219 aa17.99■□□□□ 0.47
NXF1-216ENST00000533499 NDRG2Q9UN36 371 aaKnown RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 PACSIN2Q9UNF0 486 aaPredicted RBP17.99■□□□□ 0.47
NXF1-216ENST00000533499 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.99■□□□□ 0.47
NXF1-216ENST00000533499 A0A1B0GVM2 712 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 TCAF2A6NFQ2 919 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 PSTPIP1O43586 416 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 LUC7L3O95232 432 aaKnown RBP17.98■□□□□ 0.47
NXF1-216ENST00000533499 MARCKSL1P49006 195 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 DGKGP49619 791 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 GALK1P51570 392 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 TXNDC11Q6PKC3 985 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 ZNF662Q6ZS27 426 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 CCDC50Q8IVM0 306 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 MAP7D3Q8IWC1 876 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 LRRC57Q8N9N7 239 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 FAM3CQ92520 227 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 CD101Q93033 1021 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 EXOC4Q96A65 974 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 SHDQ96IW2 340 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 PNKPQ96T60 521 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 DDX56Q9NY93 547 aaKnown RBP17.98■□□□□ 0.47
NXF1-216ENST00000533499 DNAI1Q9UI46 699 aa17.98■□□□□ 0.47
NXF1-216ENST00000533499 COL4A3Q01955 1670 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 F5P12259 2224 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 GOLGA6L9A6NEM1 432 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.97■□□□□ 0.47
NXF1-216ENST00000533499 GFRA2O00451 464 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 MAN2B1O00754 1011 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 KIF5CO60282 957 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 CACNG3O60359 315 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 CLDN11O75508 207 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 RHOCP08134 193 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 CD48P09326 243 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 ALADP13716 330 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 OR1E1P30953 314 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 OPRD1P41143 372 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 CDH4P55283 916 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 NRG1Q02297 640 aaPredicted RBP17.97■□□□□ 0.47
NXF1-216ENST00000533499 MMRN1Q13201 1228 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 UBXN2BQ14CS0 331 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 LLGL1Q15334 1064 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 DPYSL2Q16555 572 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 GAB4Q2WGN9 574 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 ZNF569Q5MCW4 686 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 RFX8Q6ZV50 586 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 POLNQ7Z5Q5 900 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 NT5DC3Q86UY8 548 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 ZNF354CQ86Y25 554 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 ZNF683Q8IZ20 524 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 UBL4BQ8N7F7 174 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 RAPGEF5Q92565 580 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 KRT35Q92764 455 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 CATSPERBQ9H7T0 1116 aa17.97■□□□□ 0.47
NXF1-216ENST00000533499 CWC15Q9P013 229 aaKnown RBP17.97■□□□□ 0.47
NXF1-216ENST00000533499 KRBA1A5PL33 1030 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 TBC1D3BA6NDS4 549 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 DRGXA6NNA5 263 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 SLC34A2O95436 690 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 APODP05090 189 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 RHOQP17081 205 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 AMPD1P23109 780 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 KDELR1P24390 212 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 PRKCQQ04759 706 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 PDK2Q15119 407 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 MPP7Q5T2T1 576 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 MANEALQ5VSG8 457 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 LRRC38Q5VT99 294 aa17.96■□□□□ 0.47
NXF1-216ENST00000533499 ZNF852Q6ZMS4 543 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms