RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 RAB41Q5JT25 222 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 MPP7Q5T2T1 576 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 ADGRF1Q5T601 910 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 C9orf64Q5T6V5 341 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 PPP1R26Q5T8A7 1209 aaPredicted RBP8.12□□□□□ -1.11
NXF1-215ENST00000533440 SPOPLQ6IQ16 392 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 NAPEPLDQ6IQ20 393 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 NELFCDQ8IXH7 590 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 SLC25A45Q8N413 288 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 KDM1BQ8NB78 822 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 VCPIP1Q96JH7 1222 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 MRGPRX3Q96LB0 322 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 OMDQ99983 421 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 NT5C1AQ9BXI3 368 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 IRX2Q9BZI1 471 aaPredicted RBP8.12□□□□□ -1.11
NXF1-215ENST00000533440 UBXN6Q9BZV1 441 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 LRRC27Q9C0I9 530 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 POLR1BQ9H9Y6 1135 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 ARHGAP20Q9P2F6 1191 aa8.12□□□□□ -1.11
NXF1-215ENST00000533440 TARSL2A2RTX5 802 aaKnown RBP8.11□□□□□ -1.11
NXF1-215ENST00000533440 OPA1O60313 960 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 MAGEC1O60732 1142 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 USP12O75317 370 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 RNASEH2AO75792 299 aaKnown RBP8.11□□□□□ -1.11
NXF1-215ENST00000533440 ASLP04424 464 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 GIMD1P0DJR0 217 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 KRT10P13645 584 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 GOT1P17174 413 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 SLC8A1P32418 973 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 YWHAGP61981 247 aaKnown RBP eCLIP8.11□□□□□ -1.11
NXF1-215ENST00000533440 PPP2CBP62714 309 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 PPP2CAP67775 309 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 ASIC1P78348 528 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 DLG4P78352 724 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 OVGP1Q12889 678 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 E2F4Q16254 413 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 COLEC12Q5KU26 742 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 KIAA1614Q5VZ46 1190 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 PM20D1Q6GTS8 502 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 SND1Q7KZF4 910 aaKnown RBP eCLIP8.11□□□□□ -1.11
NXF1-215ENST00000533440 SV2AQ7L0J3 742 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 RSRC2Q7L4I2 434 aaKnown RBP8.11□□□□□ -1.11
NXF1-215ENST00000533440 BHLHA9Q7RTU4 235 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 PRICKLE2Q7Z3G6 844 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 MMAAQ8IVH4 418 aaKnown RBP8.11□□□□□ -1.11
NXF1-215ENST00000533440 AADATQ8N5Z0 425 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 PDILTQ8N807 584 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 ZNF557Q8N988 423 aaPredicted RBP8.11□□□□□ -1.11
NXF1-215ENST00000533440 OR4C6Q8NH72 309 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 TMEM174Q8WUU8 243 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 FAM131CQ96AQ9 280 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 DEPDC7Q96QD5 511 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 FAM129BQ96TA1 746 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 CYP3A43Q9HB55 503 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 THSD1Q9NS62 852 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 OLA1Q9NTK5 396 aaKnown RBP8.11□□□□□ -1.11
NXF1-215ENST00000533440 RYDENQ9NUL5 291 aaKnown RBP8.11□□□□□ -1.11
NXF1-215ENST00000533440 DMAC2Q9NW81 257 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 TFIP11Q9UBB9 837 aaKnown RBP8.11□□□□□ -1.11
NXF1-215ENST00000533440 INTS6Q9UL03 887 aaKnown RBP8.11□□□□□ -1.11
NXF1-215ENST00000533440 SMC3Q9UQE7 1217 aa8.11□□□□□ -1.11
NXF1-215ENST00000533440 HBS1LQ9Y450 684 aaKnown RBP8.11□□□□□ -1.11
NXF1-215ENST00000533440 ITIH6Q6UXX5 1313 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 TEX15Q9BXT5 2789 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 A0A1B0GVM2 712 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 A0A1W2PNU3 283 aaPredicted RBP8.1□□□□□ -1.11
NXF1-215ENST00000533440 SDC3O75056 442 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 CSO75390 466 aaKnown RBP8.1□□□□□ -1.11
NXF1-215ENST00000533440 KIF20AO95235 890 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 ADH1BP00325 375 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 HLA-DRAP01903 254 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 NTRK1P04629 796 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 GP1BAP07359 652 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 CKMT1AP12532 417 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 C5AR1P21730 350 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 DGKAP23743 735 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 DRD3P35462 400 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 NUDT1P36639 197 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 CSKP41240 450 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 ST8SIA6P61647 398 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 DAB2P98082 770 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 AMPD3Q01432 767 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 KNOP1Q1ED39 458 aaKnown RBP8.1□□□□□ -1.11
NXF1-215ENST00000533440 C1orf220Q5T0J3 134 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 PIK3R6Q5UE93 754 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 UNC13DQ70J99 1090 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 PRPF39Q86UA1 669 aaKnown RBP8.1□□□□□ -1.11
NXF1-215ENST00000533440 PIGZQ86VD9 579 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 SLC9A9Q8IVB4 645 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 EXD3Q8N9H8 876 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 OR14C36Q8NHC7 312 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 FIBINQ8TAL6 211 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 SLC46A1Q96NT5 459 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 C7orf25Q9BPX7 421 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.1□□□□□ -1.11
NXF1-215ENST00000533440 BACH2Q9BYV9 841 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 CUEDC2Q9H467 287 aa8.1□□□□□ -1.11
NXF1-215ENST00000533440 APOBEC3GQ9HC16 384 aaKnown RBP8.1□□□□□ -1.11
NXF1-215ENST00000533440 TJP2Q9UDY2 1190 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms