RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ANTXRLA6NF34 631 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 TMEM110-MUSTN1A8MSY1 372 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.58□□□□□ -1.04
NEDD8-207ENST00000533242 GOLGA8KD6RF30 607 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 MYO1CO00159 1063 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 GABRDO14764 452 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 KAT7O95251 611 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 ITGB3P05106 788 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 CFIP05156 583 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 MMEP08473 750 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 SERPINF2P08697 491 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 KRT13P13646 458 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 TIE1P35590 1138 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 SLC6A11P48066 632 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 PPP3CCP48454 512 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 MXI1P50539 228 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 ATXN3P54252 364 aaPredicted RBP8.58□□□□□ -1.04
NEDD8-207ENST00000533242 GNGT1P63211 74 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 TFAMQ00059 246 aaKnown RBP8.58□□□□□ -1.04
NEDD8-207ENST00000533242 DHCR24Q15392 516 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 SNRNP35Q16560 246 aaKnown RBP8.58□□□□□ -1.04
NEDD8-207ENST00000533242 PROSER1Q86XN7 944 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 BRSK2Q8IWQ3 736 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 ADGRF2Q8IZF7 708 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 GOLGA6L1Q8N7Z2 621 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 TAS1R2Q8TE23 839 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 POMGNT1Q8WZA1 660 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 CAPN10Q9HC96 672 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 TRPM5Q9NZQ8 1165 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 ITGA11Q9UKX5 1188 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 ALG6Q9Y672 507 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 ZFHX4Q86UP3 3567 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 ATXN2Q99700 1313 aaKnown RBP8.58□□□□□ -1.04
NEDD8-207ENST00000533242 OLFM2O95897 454 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 ADH1CP00326 375 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 GRIA2P42262 883 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 KIR2DL1P43626 348 aaPredicted RBP8.58□□□□□ -1.04
NEDD8-207ENST00000533242 FMO1Q01740 532 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 GUCY1A3Q02108 690 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 LLGL1Q15334 1064 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 SCARA3Q6AZY7 606 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 VSTM1Q6UX27 236 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 FAM71AQ8IYT1 594 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 ADGRG2Q8IZP9 1017 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 SYCE1Q8N0S2 351 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 PPM1KQ8N3J5 372 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 FRMD1Q8N878 549 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 C1orf127Q8N9H9 656 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 KCNV2Q8TDN2 545 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 PARD3BQ8TEW8 1205 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 TMEM174Q8WUU8 243 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 HMGB4Q8WW32 186 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 TTLL2Q9BWV7 592 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 CAPS2Q9BXY5 557 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 PLXNB3Q9ULL4 1909 aa8.58□□□□□ -1.04
NEDD8-207ENST00000533242 TCRBV21S2A2A0A5A6 115 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 EIF3HO15372 352 aaKnown RBP eCLIP8.57□□□□□ -1.04
NEDD8-207ENST00000533242 OPA1O60313 960 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 ADAM23O75077 832 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 ITPKAP23677 461 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 RBP5P82980 135 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 ZXDBP98169 803 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 ZNF844Q08AG5 666 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 MAPRE1Q15691 268 aaKnown RBP8.57□□□□□ -1.04
NEDD8-207ENST00000533242 CCDC142Q17RM4 750 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 CEP85LQ5SZL2 805 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 DPH6Q7L8W6 267 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 TRMT11Q7Z4G4 463 aaKnown RBP8.57□□□□□ -1.04
NEDD8-207ENST00000533242 SFTPA1Q8IWL2 248 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 PGBD3Q8N328 593 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 CHCHD4Q8N4Q1 142 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 CXorf38Q8TB03 319 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 SEC14L1Q92503 715 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 TATDN2Q93075 761 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 RUFY1Q96T51 708 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 SYT15Q9BQS2 421 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 GTPBP2Q9BX10 602 aaKnown RBP8.57□□□□□ -1.04
NEDD8-207ENST00000533242 TRIM7Q9C029 511 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 ARHGEF4Q9NR80 690 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 DNAAF2Q9NVR5 837 aaKnown RBP8.57□□□□□ -1.04
NEDD8-207ENST00000533242 FEZ2Q9UHY8 353 aaPredicted RBP8.57□□□□□ -1.04
NEDD8-207ENST00000533242 CDH9Q9ULB4 789 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 EXOC7Q9UPT5 735 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 GPSM3Q9Y4H4 160 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 SNX9Q9Y5X1 595 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 PTPRBP23467 1997 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 IGF2RP11717 2491 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 ZNF840PA6NDX5 716 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 MYO1FO00160 1098 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 LDHAP00338 332 aaKnown RBP8.57□□□□□ -1.04
NEDD8-207ENST00000533242 SYPP08247 313 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 ADH5P11766 374 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 CD59P13987 128 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 CCT5P48643 541 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 SKOR1P84550 965 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 KDSRQ06136 332 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 MESDQ14696 234 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 C2CD6Q53TS8 623 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 EMC10Q5UCC4 262 aa8.57□□□□□ -1.04
NEDD8-207ENST00000533242 TTC27Q6P3X3 843 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms