RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 IP6K2Q9UHH9 426 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 INTUQ9ULD6 942 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 VPS13AQ96RL7 3174 aa25.62■■□□□ 1.69
USP48-214ENST00000532737 LRCH4O75427 683 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 RNF8O76064 485 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 CHRM1P11229 460 aaPredicted RBP25.61■■□□□ 1.69
USP48-214ENST00000532737 MIPP30301 263 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 HLA-FP30511 346 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 MAGEA9P43362 315 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 SEC13P55735 322 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 GSDMDP57764 484 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 SCAPQ12770 1279 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 ACBD5Q5T8D3 534 aaPredicted RBP25.61■■□□□ 1.69
USP48-214ENST00000532737 EMC10Q5UCC4 262 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 DAB2IPQ5VWQ8 1189 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 PKN3Q6P5Z2 889 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 MFN1Q8IWA4 741 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 CARNMT1Q8N4J0 409 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 LMLNQ96KR4 655 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 OSBPL2Q9H1P3 480 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 OSGEPQ9NPF4 335 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 FZD10Q9ULW2 581 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 PCDHA13Q9Y5I0 950 aa25.61■■□□□ 1.69
USP48-214ENST00000532737 DRGXA6NNA5 263 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 E9PAM4 449 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 FAM72CH0Y354 149 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 MYO1FO00160 1098 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 LUC7L3O95232 432 aaKnown RBP25.6■■□□□ 1.69
USP48-214ENST00000532737 MTAPQ13126 283 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 PIGHQ14442 188 aaPredicted RBP25.6■■□□□ 1.69
USP48-214ENST00000532737 SPA17Q15506 151 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 FSCBQ5H9T9 825 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 FAM72AQ5TYM5 149 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 TTC39BQ5VTQ0 682 aaPredicted RBP25.6■■□□□ 1.69
USP48-214ENST00000532737 FAM72DQ6L9T8 149 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 LRRC31Q6UY01 552 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 FAM72BQ86X60 149 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 CCAR2Q8N163 923 aaKnown RBP25.6■■□□□ 1.69
USP48-214ENST00000532737 FIBINQ8TAL6 211 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 SLC35G2Q8TBE7 412 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 PEBP4Q96S96 227 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 ABCB8Q9NUT2 735 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 OR12D3Q9UGF7 316 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 PCSK1NQ9UHG2 260 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 HCN2Q9UL51 889 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 RIF1Q5UIP0 2472 aaKnown RBP25.6■■□□□ 1.69
USP48-214ENST00000532737 MYO15AQ9UKN7 3530 aa25.6■■□□□ 1.69
USP48-214ENST00000532737 MIA3Q5JRA6 1907 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 KIAA1549LQ6ZVL6 1849 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 IGLV3-10A0A075B6K4 115 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 GFRA3O60609 400 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 SRGAP2O75044 1071 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 CNTN5O94779 1100 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 CD70P32970 193 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 KIR2DL1P43626 348 aaPredicted RBP25.59■■□□□ 1.69
USP48-214ENST00000532737 ACAP1Q15027 740 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 ALFQ53S48 1182 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 NUDT18Q6ZVK8 323 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 PYROXD2Q8N2H3 581 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.59■■□□□ 1.69
USP48-214ENST00000532737 NIPA2Q8N8Q9 360 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 USP33Q8TEY7 942 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 MPP6Q9NZW5 540 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 TFR2Q9UP52 801 aa25.59■■□□□ 1.69
USP48-214ENST00000532737 REXO2Q9Y3B8 237 aaKnown RBP25.59■■□□□ 1.69
USP48-214ENST00000532737 FAM186AA6NE01 2351 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 A0A1B0GVM2 712 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 TCAF2A6NFQ2 919 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 H0Y626 953 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 PCK1P35558 622 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 NRG1Q02297 640 aaPredicted RBP25.58■■□□□ 1.69
USP48-214ENST00000532737 LMAN2Q12907 356 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 CDH18Q13634 790 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 C2orf27AQ580R0 203 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 EFHC2Q5JST6 749 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 MANEALQ5VSG8 457 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 TMEM215Q68D42 235 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 CYP4V2Q6ZWL3 525 aaPredicted RBP25.58■■□□□ 1.69
USP48-214ENST00000532737 ANKS1BQ7Z6G8 1248 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 KIAA0907Q7Z7F0 614 aaPredicted RBP25.58■■□□□ 1.69
USP48-214ENST00000532737 RPLP0P6Q8NHW5 317 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 RFFLQ8WZ73 363 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 NCAPGQ9BPX3 1015 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 ZDHHC4Q9NPG8 344 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 SPATA6Q9NWH7 488 aaPredicted RBP25.58■■□□□ 1.69
USP48-214ENST00000532737 GPATCH2LQ9NWQ4 482 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 C2orf42Q9NWW7 574 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 GGA2Q9UJY4 613 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 STARD13Q9Y3M8 1113 aa25.58■■□□□ 1.69
USP48-214ENST00000532737 PTPRZ1P23471 2315 aaPredicted RBP25.58■■□□□ 1.68
USP48-214ENST00000532737 PROB1E7EW31 1015 aa25.57■■□□□ 1.68
USP48-214ENST00000532737 PABPC1P11940 636 aaKnown RBP25.57■■□□□ 1.68
USP48-214ENST00000532737 TCF4P15884 667 aa25.57■■□□□ 1.68
USP48-214ENST00000532737 AIF1P55008 147 aa25.57■■□□□ 1.68
USP48-214ENST00000532737 TCEAL1Q15170 157 aa25.57■■□□□ 1.68
USP48-214ENST00000532737 CHST9Q7L1S5 443 aa25.57■■□□□ 1.68
USP48-214ENST00000532737 ADIPOR2Q86V24 386 aa25.57■■□□□ 1.68
USP48-214ENST00000532737 CPNE8Q86YQ8 564 aa25.57■■□□□ 1.68
USP48-214ENST00000532737 CCDC117Q8IWD4 279 aaPredicted RBP25.57■■□□□ 1.68
USP48-214ENST00000532737 SPEM1Q8N4L4 309 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms