RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.82■■□□□ 1.4
LTBP3-220ENST00000532661 ANGPTL2Q9UKU9 493 aa23.82■■□□□ 1.4
LTBP3-220ENST00000532661 FHOD1Q9Y613 1164 aa23.82■■□□□ 1.4
LTBP3-220ENST00000532661 ACACBO00763 2458 aa23.82■■□□□ 1.4
LTBP3-220ENST00000532661 PI4KAP42356 2102 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 FAM170AA1A519 330 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 METTL12A8MUP2 240 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 KCNU1A8MYU2 1149 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 H0Y626 953 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 PES1O00541 588 aaKnown RBP23.81■■□□□ 1.4
LTBP3-220ENST00000532661 GLI1P08151 1106 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 CEACAM1P13688 526 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 ACSL1P33121 698 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 NUMBP49757 651 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 RAPGEF1Q13905 1077 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 DRAP1Q14919 205 aaPredicted RBP23.81■■□□□ 1.4
LTBP3-220ENST00000532661 OLFML1Q6UWY5 402 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 CLEC17AQ6ZS10 378 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 C11orf57Q6ZUT1 292 aaPredicted RBP23.81■■□□□ 1.4
LTBP3-220ENST00000532661 CIR1Q86X95 450 aaPredicted RBP23.81■■□□□ 1.4
LTBP3-220ENST00000532661 ZCCHC9Q8N567 271 aaKnown RBP23.81■■□□□ 1.4
LTBP3-220ENST00000532661 ATP6V0D2Q8N8Y2 350 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 PRMT1Q99873 361 aaKnown RBP23.81■■□□□ 1.4
LTBP3-220ENST00000532661 ASNSD1Q9NWL6 643 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 DDIT4Q9NX09 232 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 SUN2Q9UH99 717 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 CHD8Q9HCK8 2581 aa23.81■■□□□ 1.4
LTBP3-220ENST00000532661 ADAMTS9Q9P2N4 1935 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 PCDH15Q96QU1 1955 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 HSF2BPO75031 334 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 C7P10643 843 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 GNSP15586 552 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 SEMA3BQ13214 749 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 KLHDC7AQ5VTJ3 777 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 CCDC117Q8IWD4 279 aaPredicted RBP23.8■■□□□ 1.4
LTBP3-220ENST00000532661 APCDD1Q8J025 514 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 NOX5Q96PH1 765 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 KIAA1522Q9P206 1035 aaPredicted RBP23.8■■□□□ 1.4
LTBP3-220ENST00000532661 SUSD2Q9UGT4 822 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 ERVW-1Q9UQF0 538 aa23.8■■□□□ 1.4
LTBP3-220ENST00000532661 ASCC3Q8N3C0 2202 aaKnown RBP23.79■■□□□ 1.4
LTBP3-220ENST00000532661 F5H5T6 163 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 OPHN1O60890 802 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 SYPP08247 313 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 ANP32AP39687 249 aaKnown RBP23.79■■□□□ 1.4
LTBP3-220ENST00000532661 ST8SIA6P61647 398 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 SLC6A3Q01959 620 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 TCP11X2Q5H9J9 407 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 PIP4P1Q86T03 277 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 DHX40Q8IX18 779 aaKnown RBP23.79■■□□□ 1.4
LTBP3-220ENST00000532661 HDDC3Q8N4P3 179 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 RNF34Q969K3 372 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 C6orf106Q9H6K1 298 aaPredicted RBP23.79■■□□□ 1.4
LTBP3-220ENST00000532661 TAB2Q9NYJ8 693 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 SLC12A6Q9UHW9 1150 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 EIF2B4Q9UI10 523 aaKnown RBP23.79■■□□□ 1.4
LTBP3-220ENST00000532661 NFE2L3Q9Y4A8 694 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 SLCO1B1Q9Y6L6 691 aa23.79■■□□□ 1.4
LTBP3-220ENST00000532661 A0A1B0GTW7 788 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 SIN3BO75182 1162 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 DNTTP04053 509 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 ASLP04424 464 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 CCR1P32246 355 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 SHC2P98077 582 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 FOXC1Q12948 553 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 NME3Q13232 169 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 HNRNPA1L2Q32P51 320 aaKnown RBP23.78■■□□□ 1.4
LTBP3-220ENST00000532661 NAA15Q9BXJ9 866 aaKnown RBP23.78■■□□□ 1.4
LTBP3-220ENST00000532661 ADAM33Q9BZ11 813 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 SYNCQ9H7C4 482 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 FBRSQ9HAH7 460 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 SLCO3A1Q9UIG8 710 aa23.78■■□□□ 1.4
LTBP3-220ENST00000532661 EPG5Q9HCE0 2579 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 TTC34A8MYJ7 566 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 DAB1O75553 588 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 TOP3BO95985 862 aaKnown RBP23.77■■□□□ 1.4
LTBP3-220ENST00000532661 CD59P13987 128 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 CYP11B1P15538 503 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 ABCB4P21439 1286 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 GGCXP38435 758 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 BPIFB4P59827 614 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 GRIK2Q13002 908 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 OTUD1Q5VV17 481 aaPredicted RBP23.77■■□□□ 1.4
LTBP3-220ENST00000532661 TAF3Q5VWG9 929 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 ZNF776Q68DI1 518 aaPredicted RBP23.77■■□□□ 1.4
LTBP3-220ENST00000532661 SMYD5Q6GMV2 418 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 FBXL22Q6P050 247 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 SLC26A9Q7LBE3 791 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 CCAR2Q8N163 923 aaKnown RBP23.77■■□□□ 1.4
LTBP3-220ENST00000532661 C1orf216Q8TAB5 229 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 GPT2Q8TD30 523 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 SNX19Q92543 992 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 IGSF8Q969P0 613 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 RPL10LQ96L21 214 aaKnown RBP23.77■■□□□ 1.4
LTBP3-220ENST00000532661 RSPH9Q9H1X1 276 aaPredicted RBP23.77■■□□□ 1.4
LTBP3-220ENST00000532661 PDCL3Q9H2J4 239 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 SLC32A1Q9H598 525 aa23.77■■□□□ 1.4
LTBP3-220ENST00000532661 DNAAF2Q9NVR5 837 aaKnown RBP23.77■■□□□ 1.4
LTBP3-220ENST00000532661 SPAARA0A1B0GVQ0 90 aa23.76■■□□□ 1.39
LTBP3-220ENST00000532661 GJB3O75712 270 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms