RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 FAM136AQ96C01 138 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 DTNBP1Q96EV8 351 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 TBCBQ99426 244 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 HTATIP2Q9BUP3 242 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 ETNK1Q9HBU6 452 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 BTBD7Q9P203 1132 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 TMEM120BA0PK00 339 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 SKAP2O75563 359 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-232ENST00000532649 GJB6O95452 261 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 RPN2P04844 631 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 ENO3P13929 434 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-232ENST00000532649 AMPD1P23109 780 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 ATP12AP54707 1039 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CNGA2Q16280 664 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 MIIPQ5JXC2 388 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 WLSQ5T9L3 541 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 AGBL2Q5U5Z8 902 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CAPRIN2Q6IMN6 1127 aaKnown RBP8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CCDC81Q6ZN84 652 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 NYAP1Q6ZVC0 841 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 C16orf59Q7L2K0 433 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 UNC93AQ86WB7 457 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CCNJLQ8IV13 435 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CENPLQ8N0S6 344 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-232ENST00000532649 LPCAT1Q8NF37 534 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 ACTRT1Q8TDG2 376 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 KAT5Q92993 513 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 PIGUQ9H490 435 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 RNPEPQ9H4A4 650 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 AVENQ9NQS1 362 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CHURC1-FNTBB4DL54 471 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 ANKRD65E5RJM6 399 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 VPS26AO75436 327 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 IFNA14P01570 189 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 MPOP05164 745 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 KDSRQ06136 332 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 SGCGQ13326 291 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CCNG2Q16589 344 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 PGS1Q32NB8 556 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CLPBQ9H078 707 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 TKTL2Q9H0I9 626 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 HIPK3Q9H422 1215 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 OSGEPL1Q9H4B0 414 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 TBC1D13Q9NVG8 400 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 XRN1Q8IZH2 1706 aaKnown RBP8.92□□□□□ -0.98
CTNND1-232ENST00000532649 DDX3XO00571 662 aaKnown RBP eCLIP8.92□□□□□ -0.982e-13■□□□□ 9.3
CTNND1-232ENST00000532649 NDUFS2O75306 463 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CAPN15O75808 1086 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 SOX11P35716 441 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 ABHD15Q6UXT9 468 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CCDC149Q6ZUS6 474 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 LRRC6Q86X45 466 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 UBE2OQ9C0C9 1292 aaKnown RBP8.92□□□□□ -0.98
CTNND1-232ENST00000532649 SPRTNQ9H040 489 aaPredicted RBP8.92□□□□□ -0.98
CTNND1-232ENST00000532649 ABCC13Q9NSE7 274 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 DYTNA2CJ06 578 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 SPTLC1O15269 473 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 CALCAP01258 141 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 SERPINF2P08697 491 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 GSTM1P09488 218 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 PGM1P36871 562 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 AGAP9Q5VTM2 703 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 FAM45BPQ6NSW5 357 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 ECSITQ9BQ95 431 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 MARCH2Q9P0N8 246 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 WHRNQ9P202 907 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 GGT7Q9UJ14 662 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 RNF112Q9ULX5 631 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 SH3GLB1Q9Y371 365 aa8.92□□□□□ -0.98
CTNND1-232ENST00000532649 PPP1R37O75864 691 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 SERPINB1P30740 379 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 RENBPP51606 427 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 CYP51A1Q16850 503 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 PABPC1LQ4VXU2 614 aaKnown RBP8.91□□□□□ -0.98
CTNND1-232ENST00000532649 ILDR2Q71H61 639 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 SLC44A2Q8IWA5 706 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-232ENST00000532649 AHI1Q8N157 1196 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 MCOLN3Q8TDD5 553 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 USP7Q93009 1102 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 THTPAQ9BU02 230 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 RGS18Q9NS28 235 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 FAM105AQ9NUU6 356 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 TBC1D23Q9NUY8 699 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 VAV3Q9UKW4 847 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 VANGL2Q9ULK5 521 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 COL1A2P08123 1366 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 NCF1BA6NI72 391 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-232ENST00000532649 NCF1CA8MVU1 366 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-232ENST00000532649 OR6A2O95222 327 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 NCF1P14598 390 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-232ENST00000532649 YBX3P16989 372 aaKnown RBP eCLIP8.91□□□□□ -0.989e-12■□□□□ 9.1
CTNND1-232ENST00000532649 NPR3P17342 541 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 PLOD1Q02809 727 aaPredicted RBP8.91□□□□□ -0.98
CTNND1-232ENST00000532649 FUT2Q10981 343 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 CHI3L2Q15782 390 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 ECM1Q16610 540 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 EEF1DP3Q658K8 133 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 DENND1BQ6P3S1 775 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 TPGS1Q6ZTW0 290 aa8.91□□□□□ -0.98
CTNND1-232ENST00000532649 OTOAQ7RTW8 1153 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms