RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 NDST4Q9H3R1 872 aa17.08■□□□□ 0.32
CAVIN3-204ENST00000532354 MTG2Q9H4K7 406 aa17.08■□□□□ 0.32
CAVIN3-204ENST00000532354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.08■□□□□ 0.32
CAVIN3-204ENST00000532354 ASNSD1Q9NWL6 643 aa17.08■□□□□ 0.32
CAVIN3-204ENST00000532354 KMT2BQ9UMN6 2715 aaPredicted RBP17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 KCNU1A8MYU2 1149 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 GJB3O75712 270 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 LUC7L3O95232 432 aaKnown RBP17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 ASLP04424 464 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 CD59P13987 128 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 ERCC5P28715 1186 aaPredicted RBP17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 ACSL1P33121 698 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 ST8SIA6P61647 398 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 CDH18Q13634 790 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 VWA3BQ502W6 1294 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 EFHC1Q5JVL4 640 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 SLC47A2Q86VL8 602 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 CHSY1Q86X52 802 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 CCDC117Q8IWD4 279 aaPredicted RBP17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 FAM114A1Q8IWE2 563 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 ZCCHC9Q8N567 271 aaKnown RBP17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 ATP6V0D2Q8N8Y2 350 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 C1orf216Q8TAB5 229 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 PRMT1Q99873 361 aaKnown RBP17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 TUBGCP2Q9BSJ2 902 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 MIR1-1HGQ9H1L0 117 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 EIF2B4Q9UI10 523 aaKnown RBP17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 CACNA1EQ15878 2313 aa17.07■□□□□ 0.32
CAVIN3-204ENST00000532354 PCNX2A6NKB5 2137 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 H0Y626 953 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 DNTTP04053 509 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 PNMA6AP0CW24 399 aaPredicted RBP17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 KRT9P35527 623 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 CDK17Q00537 523 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 FOXC1Q12948 553 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 GRIK2Q13002 908 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 SLC14A1Q13336 389 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 ARID5BQ14865 1188 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 HNRNPA1L2Q32P51 320 aaKnown RBP17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 PITRM1Q5JRX3 1037 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 C11orf57Q6ZUT1 292 aaPredicted RBP17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 FAM71AQ8IYT1 594 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 KDM1BQ8NB78 822 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 C1orf131Q8NDD1 294 aaKnown RBP17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 ZDHHC5Q9C0B5 715 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 RSPH9Q9H1X1 276 aaPredicted RBP17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 C6orf106Q9H6K1 298 aaPredicted RBP17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 KIAA1522Q9P206 1035 aaPredicted RBP17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 SLC12A6Q9UHW9 1150 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 ERVW-1Q9UQF0 538 aa17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 MAP1BP46821 2468 aaKnown RBP17.06■□□□□ 0.32
CAVIN3-204ENST00000532354 CEP295Q9C0D2 2601 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 BCAT2O15382 392 aaPredicted RBP17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 HSF2BPO75031 334 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 SIN3BO75182 1162 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 GRAP2O75791 330 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 TOP3BO95985 862 aaKnown RBP17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 ERBB2P04626 1255 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 SLC2A3P11169 496 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 PRKCSHP14314 528 aaPredicted RBP17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 CTSOP43234 321 aaPredicted RBP17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 BNC1Q01954 994 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 KCNMA1Q12791 1236 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 ZNF776Q68DI1 518 aaPredicted RBP17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 OR6B2Q6IFH4 312 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 OLFML1Q6UWY5 402 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 FAM183BPQ6ZVS7 135 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 APCDD1Q8J025 514 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 NOX5Q96PH1 765 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 BTBD1Q9H0C5 482 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 NUP62CLQ9H1M0 184 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 FAM204AQ9H8W3 233 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 DDIT4Q9NX09 232 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 DACH1Q9UI36 760 aa17.05■□□□□ 0.32
CAVIN3-204ENST00000532354 SYNJ2BP-COX16A0A087WUM0 186 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 SPAARA0A1B0GVQ0 90 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 TTC34A8MYJ7 566 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 F5H5T6 163 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 MOCS3O95396 460 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 SRPRAP08240 638 aaKnown RBP17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 SPINK2P20155 84 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 ABCB4P21439 1286 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 CCR1P32246 355 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 SNX16P57768 344 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 FAM193AP78312 1265 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 SIM1P81133 766 aaPredicted RBP17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 ECT2LQ008S8 904 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 SLC6A3Q01959 620 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 DRAP1Q14919 205 aaPredicted RBP17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 NUMA1Q14980 2115 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 PTPN20Q4JDL3 420 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 C9orf64Q5T6V5 341 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 CLEC17AQ6ZS10 378 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 DHX40Q8IX18 779 aaKnown RBP17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 RNF34Q969K3 372 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 PLCB1Q9NQ66 1216 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 SAMSN1Q9NSI8 373 aaKnown RBP17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 COX16Q9P0S2 106 aa17.04■□□□□ 0.32
CAVIN3-204ENST00000532354 SLCO3A1Q9UIG8 710 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms