RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 IRAK2O43187 625 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 SIN3BO75182 1162 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 DKK1O94907 266 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 FYNP06241 537 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 IGHV4-34P06331 123 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 CSKP41240 450 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 SUZ12Q15022 739 aaKnown RBP19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 CNGA2Q16280 664 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 CCDC157Q569K6 752 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 ISM2Q6H9L7 571 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 MMS22LQ6ZRQ5 1243 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 ADAT2Q7Z6V5 191 aaKnown RBP19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 DHX40Q8IX18 779 aaKnown RBP19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 CFAP52Q8N1V2 620 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 HJURPQ8NCD3 748 aaPredicted RBP19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 FIBINQ8TAL6 211 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 ADAM32Q8TC27 787 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 GANCQ8TET4 914 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 GOLGA1Q92805 767 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 IGSF8Q969P0 613 aa19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 FCRL2Q96LA5 508 aaPredicted RBP19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 NUCKS1Q9H1E3 243 aaKnown RBP19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 PABPC3Q9H361 631 aaKnown RBP19.12■□□□□ 0.65
SSSCA1-206ENST00000531405 CTSOP43234 321 aaPredicted RBP19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 CTSKP43235 329 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 CCT8P50990 548 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 COL28A1Q2UY09 1125 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 FSCBQ5H9T9 825 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 KIAA0895LQ68EN5 471 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 RRAGAQ7L523 313 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 ARHGEF19Q8IW93 802 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 SPATA20Q8TB22 786 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 DQX1Q8TE96 717 aaKnown RBP19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 SMARCE1Q969G3 411 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 TTC17Q96AE7 1141 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 MRGPRX3Q96LB0 322 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 FBXL12Q9NXK8 326 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 RAXQ9Y2V3 346 aa19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 GCN1Q92616 2671 aaKnown RBP19.11■□□□□ 0.65
SSSCA1-206ENST00000531405 FAM149AA5PLN7 773 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 MID1O15344 667 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 SMC2O95347 1197 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 MOCS2O96007 188 aaPredicted RBP19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 CD44P16070 742 aaKnown RBP19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 GRK6P43250 576 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 NUMBP49757 651 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 ST8SIA6P61647 398 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 HNRNPA1L2Q32P51 320 aaKnown RBP19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 CCDC40Q4G0X9 1142 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 SCUBE3Q8IX30 993 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 ENGASEQ8NFI3 743 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 LMO3Q8TAP4 145 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 AZIN2Q96A70 460 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 HSFY1Q96LI6 401 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 SLC6A18Q96N87 628 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 IRX2Q9BZI1 471 aaPredicted RBP19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 METTL14Q9HCE5 456 aaKnown RBP19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 XPO7Q9UIA9 1087 aaKnown RBP19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 NAALADL1Q9UQQ1 740 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 NCKAP1Q9Y2A7 1128 aa19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 ARID1BQ8NFD5 2236 aaPredicted RBP19.1■□□□□ 0.65
SSSCA1-206ENST00000531405 A0A1W2PP55 124 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 TYW5A2RUC4 315 aaKnown RBP19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 TTC34A8MYJ7 566 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 TNFSF14O43557 240 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 FBXO21O94952 628 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 GALCP54803 685 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 CDH18Q13634 790 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 STILQ15468 1287 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 CST6Q15828 149 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 DCAF6Q58WW2 860 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 MS4A13Q5J8X5 152 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 PITRM1Q5JRX3 1037 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 PRAMEF14Q5SWL7 426 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 C9orf64Q5T6V5 341 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 NCEH1Q6PIU2 408 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 USP30Q70CQ3 517 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 TAC4Q86UU9 113 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 MMAAQ8IVH4 418 aaKnown RBP19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 ZNF557Q8N988 423 aaPredicted RBP19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 HNRNPLLQ8WVV9 542 aaKnown RBP19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 FAM149B1Q96BN6 582 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 SERPINB11Q96P15 392 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 NEUROG2Q9H2A3 272 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 EBF2Q9HAK2 575 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 ST7Q9NRC1 585 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 ERVW-1Q9UQF0 538 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 TLR6Q9Y2C9 796 aa19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 TDRD6O60522 2096 aaKnown RBP19.09■□□□□ 0.65
SSSCA1-206ENST00000531405 SHROOM3Q8TF72 1996 aa19.08■□□□□ 0.65
SSSCA1-206ENST00000531405 PSMA7O14818 248 aa19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 PCDHGA12O60330 932 aa19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 RNASEH2AO75792 299 aaKnown RBP19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 ASLP04424 464 aa19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 C21orf59P57076 290 aa19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 SYPL2Q5VXT5 272 aa19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 KLHL10Q6JEL2 608 aa19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 PDZD3Q86UT5 571 aa19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 SLC39A13Q96H72 371 aa19.08■□□□□ 0.64
SSSCA1-206ENST00000531405 CEP63Q96MT8 703 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms