RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 GABRG2P18507 467 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 BCKDHBP21953 392 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 RRM1P23921 792 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 CTSOP43234 321 aaPredicted RBP19.34■□□□□ 0.69
GMDS-208ENST00000530927 RPL7AP62424 266 aaKnown RBP19.34■□□□□ 0.69
GMDS-208ENST00000530927 KLHL30Q0D2K2 578 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 CDH18Q13634 790 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 PTPRNQ16849 979 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 FIGNQ5HY92 759 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 MBLAC2Q68D91 279 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 TRMT11Q7Z4G4 463 aaKnown RBP19.34■□□□□ 0.69
GMDS-208ENST00000530927 MCOLN2Q8IZK6 566 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 OR52K2Q8NGK3 314 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 FIBINQ8TAL6 211 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 RPRD1AQ96P16 312 aaPredicted RBP19.34■□□□□ 0.69
GMDS-208ENST00000530927 HINFPQ9BQA5 517 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 SELENOOQ9BVL4 669 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 POLMQ9NP87 494 aaPredicted RBP19.34■□□□□ 0.69
GMDS-208ENST00000530927 RRN3Q9NYV6 651 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 BCCIPQ9P287 314 aaKnown RBP eCLIP19.34■□□□□ 0.698e-6■□□□□ 10.9
GMDS-208ENST00000530927 CCDC163A0A0D9SF12 145 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 H0Y626 953 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 CNTN5O94779 1100 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 CALB1P05937 261 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 CCDC172P0C7W6 258 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 KRT3P12035 628 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 RDXP35241 583 aaKnown RBP19.34■□□□□ 0.69
GMDS-208ENST00000530927 PRKCIP41743 596 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 GSCP56915 257 aaPredicted RBP19.34■□□□□ 0.69
GMDS-208ENST00000530927 C1QBPQ07021 282 aaKnown RBP19.34■□□□□ 0.69
GMDS-208ENST00000530927 HGSNATQ68CP4 663 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 WDR59Q6PJI9 974 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 CACUL1Q86Y37 369 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 APCDD1Q8J025 514 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 AHI1Q8N157 1196 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 CCAR2Q8N163 923 aaKnown RBP19.34■□□□□ 0.69
GMDS-208ENST00000530927 PGBD3Q8N328 593 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 MCEEQ96PE7 176 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 RBSNQ9H1K0 784 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 MTG2Q9H4K7 406 aa19.34■□□□□ 0.69
GMDS-208ENST00000530927 DMXL1Q9Y485 3027 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 A0A1W2PQJ5 194 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 TYW5A2RUC4 315 aaKnown RBP19.33■□□□□ 0.68
GMDS-208ENST00000530927 AP5Z1O43299 807 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 NDUFV2P19404 249 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 MZF1P28698 734 aaPredicted RBP19.33■□□□□ 0.68
GMDS-208ENST00000530927 CSKP41240 450 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 OGDHQ02218 1023 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 ENPP2Q13822 863 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 ALFQ53S48 1182 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 BRMS1LQ5PSV4 323 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 SDE2Q6IQ49 451 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 CXorf57Q6NSI4 855 aaKnown RBP19.33■□□□□ 0.68
GMDS-208ENST00000530927 DNAJC24Q6P3W2 148 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 SND1Q7KZF4 910 aaKnown RBP eCLIP19.33■□□□□ 0.68
GMDS-208ENST00000530927 ARCQ7LC44 396 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 ZNF683Q8IZ20 524 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 C3orf20Q8ND61 904 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 UCMAQ8WVF2 138 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 NUP58Q9BVL2 599 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 EDEM3Q9BZQ6 932 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 CAPN11Q9UMQ6 739 aa19.33■□□□□ 0.68
GMDS-208ENST00000530927 ALDH1A2O94788 518 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 ENDOD1O94919 500 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 SDC4P31431 198 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 CASP14P31944 242 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 CNR2P34972 360 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 HDAC4P56524 1084 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 EIF4HQ15056 248 aaKnown RBP19.32■□□□□ 0.68
GMDS-208ENST00000530927 CCDC6Q16204 474 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 OTOGLQ3ZCN5 2332 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 FNDC3BQ53EP0 1204 aaKnown RBP19.32■□□□□ 0.68
GMDS-208ENST00000530927 PITRM1Q5JRX3 1037 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 PPP1R15BQ5SWA1 713 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 WFIKKN2Q8TEU8 576 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 FAM172AQ8WUF8 416 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 IRX2Q9BZI1 471 aaPredicted RBP19.32■□□□□ 0.68
GMDS-208ENST00000530927 MPP6Q9NZW5 540 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 NCDNQ9UBB6 729 aa19.32■□□□□ 0.68
GMDS-208ENST00000530927 MBD1Q9UIS9 605 aaPredicted RBP19.32■□□□□ 0.68
GMDS-208ENST00000530927 SIGLEC16A6NMB1 481 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 CCP110O43303 1012 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 F9P00740 461 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 GPD1P21695 349 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 TDRD12Q587J7 1177 aaKnown RBP19.31■□□□□ 0.68
GMDS-208ENST00000530927 RABGAP1LQ5R372 815 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 SERPINA13PQ6UXR4 307 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.31■□□□□ 0.68
GMDS-208ENST00000530927 CCDC185Q8N715 623 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 MYO19Q96H55 970 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 TRIM7Q9C029 511 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 MKRN2Q9H000 416 aaKnown RBP19.31■□□□□ 0.68
GMDS-208ENST00000530927 PARD6AQ9NPB6 346 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 ZNF292O60281 2723 aa19.31■□□□□ 0.68
GMDS-208ENST00000530927 FTLP02792 175 aaPredicted RBP19.3■□□□□ 0.68
GMDS-208ENST00000530927 EPHX1P07099 455 aa19.3■□□□□ 0.68
GMDS-208ENST00000530927 POLR2EP19388 210 aaKnown RBP19.3■□□□□ 0.68
GMDS-208ENST00000530927 PTPN9P43378 593 aa19.3■□□□□ 0.68
GMDS-208ENST00000530927 ZBED6P86452 979 aa19.3■□□□□ 0.68
GMDS-208ENST00000530927 PLK5Q496M5 336 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms