RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 PPM1KQ8N3J5 372 aa18.9■□□□□ 0.62
PSMC3-208ENST00000530887 IL21RQ9HBE5 538 aa18.9■□□□□ 0.62
PSMC3-208ENST00000530887 SCUBE2Q9NQ36 999 aa18.9■□□□□ 0.62
PSMC3-208ENST00000530887 PCDHGA1Q9Y5H4 931 aa18.9■□□□□ 0.62
PSMC3-208ENST00000530887 DMXL2Q8TDJ6 3036 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 BICDL2A1A5D9 508 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 MSI1O43347 362 aaKnown RBP18.89■□□□□ 0.61
PSMC3-208ENST00000530887 APOEP02649 317 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 SULT2A1Q06520 285 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 ACAP1Q15027 740 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 CCDC40Q4G0X9 1142 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 FAM133BQ5BKY9 247 aaKnown RBP18.89■□□□□ 0.61
PSMC3-208ENST00000530887 RNF219Q5W0B1 726 aaPredicted RBP18.89■□□□□ 0.61
PSMC3-208ENST00000530887 PMF1Q6P1K2 205 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 SLCO6A1Q86UG4 719 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 OXR1Q8N573 874 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 PNPLA1Q8N8W4 532 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 GANCQ8TET4 914 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 STK32AQ8WU08 396 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 NDRG1Q92597 394 aaKnown RBP18.89■□□□□ 0.61
PSMC3-208ENST00000530887 FBXL12Q9NXK8 326 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 ADAMTS1Q9UHI8 967 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 SLC12A6Q9UHW9 1150 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 GPSM3Q9Y4H4 160 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 SNX11Q9Y5W9 270 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 NUMA1Q14980 2115 aa18.89■□□□□ 0.61
PSMC3-208ENST00000530887 MUC22E2RYF6 1773 aaPredicted RBP18.88■□□□□ 0.61
PSMC3-208ENST00000530887 GOLGA4Q13439 2230 aaKnown RBP18.88■□□□□ 0.61
PSMC3-208ENST00000530887 APC2O95996 2303 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 EDDM13A0A1B0GTR0 161 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 A0A1W2PPC4 97 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 TAF4O00268 1085 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 CAPN9O14815 690 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 MED7O43513 233 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 ADH1BP00325 375 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 C1SP09871 688 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 CTSKP43235 329 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 RPL34P49207 117 aaKnown RBP18.88■□□□□ 0.61
PSMC3-208ENST00000530887 TTC39BQ5VTQ0 682 aaPredicted RBP18.88■□□□□ 0.61
PSMC3-208ENST00000530887 PDCD7Q8N8D1 485 aaKnown RBP18.88■□□□□ 0.61
PSMC3-208ENST00000530887 OR2T34Q8NGX1 318 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 MED15Q96RN5 788 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 TJP2Q9UDY2 1190 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 FTSJ1Q9UET6 329 aa18.88■□□□□ 0.61
PSMC3-208ENST00000530887 MAGEC1O60732 1142 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 SLC2A3P11169 496 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 CD70P32970 193 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 CSKP41240 450 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 CCR5P51681 352 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 NUCB2P80303 420 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 LRMPQ12912 555 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 CST6Q15828 149 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 MS4A13Q5J8X5 152 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 RFWD3Q6PCD5 774 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 ITIH6Q6UXX5 1313 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 ENOSF1Q7L5Y1 443 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 TMPRSS12Q86WS5 348 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 OMDQ99983 421 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 KDM4CQ9H3R0 1056 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 TMEM51Q9NW97 253 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 TOR4AQ9NXH8 423 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 BAHCC1Q9P281 2608 aa18.87■□□□□ 0.61
PSMC3-208ENST00000530887 SPEGQ15772 3267 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 A0A1B0GTQ1 180 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 LUC7L3O95232 432 aaKnown RBP18.86■□□□□ 0.61
PSMC3-208ENST00000530887 FGFR1OPO95684 399 aaKnown RBP18.86■□□□□ 0.61
PSMC3-208ENST00000530887 C5AR1P21730 350 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 HNF1BP35680 557 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 ARRB1P49407 418 aaPredicted RBP18.86■□□□□ 0.61
PSMC3-208ENST00000530887 RGS7P49802 495 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 ECT2LQ008S8 904 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 SMAD1Q15797 465 aaKnown RBP18.86■□□□□ 0.61
PSMC3-208ENST00000530887 SND1Q7KZF4 910 aaKnown RBP eCLIP18.86■□□□□ 0.616e-7■■□□□ 14.4
PSMC3-208ENST00000530887 DSG4Q86SJ6 1040 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 ZNF366Q8N895 744 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 DQX1Q8TE96 717 aaKnown RBP18.86■□□□□ 0.61
PSMC3-208ENST00000530887 TFAP2BQ92481 460 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 FAM149B1Q96BN6 582 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 SLC39A13Q96H72 371 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 LMLNQ96KR4 655 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 BTN2A3PQ96KV6 586 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 FCRL2Q96LA5 508 aaPredicted RBP18.86■□□□□ 0.61
PSMC3-208ENST00000530887 ELF4Q99607 663 aaPredicted RBP18.86■□□□□ 0.61
PSMC3-208ENST00000530887 STIM2Q9P246 746 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 RALYQ9UKM9 306 aaKnown RBP18.86■□□□□ 0.61
PSMC3-208ENST00000530887 CEP83Q9Y592 693 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 PTPRBP23467 1997 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 PLXNB3Q9ULL4 1909 aa18.86■□□□□ 0.61
PSMC3-208ENST00000530887 FASNP49327 2511 aaKnown RBP18.85■□□□□ 0.61
PSMC3-208ENST00000530887 URB1O60287 2271 aaKnown RBP18.85■□□□□ 0.61
PSMC3-208ENST00000530887 DSPP15924 2871 aaKnown RBP18.85■□□□□ 0.61
PSMC3-208ENST00000530887 SLC7A4O43246 635 aa18.85■□□□□ 0.61
PSMC3-208ENST00000530887 SIN3BO75182 1162 aa18.85■□□□□ 0.61
PSMC3-208ENST00000530887 ATXN1LP0C7T5 689 aaKnown RBP18.85■□□□□ 0.61
PSMC3-208ENST00000530887 SLC6A4P31645 630 aa18.85■□□□□ 0.61
PSMC3-208ENST00000530887 VASPP50552 380 aaPredicted RBP18.85■□□□□ 0.61
PSMC3-208ENST00000530887 GALCP54803 685 aa18.85■□□□□ 0.61
PSMC3-208ENST00000530887 SNX16P57768 344 aa18.85■□□□□ 0.61
PSMC3-208ENST00000530887 OVGP1Q12889 678 aa18.85■□□□□ 0.61
PSMC3-208ENST00000530887 ELAVL3Q14576 367 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms