RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 PGDP52209 483 aa8.08□□□□□ -1.12
CSDE1-213ENST00000530784 TUBA4AP68366 448 aa8.08□□□□□ -1.12
CSDE1-213ENST00000530784 HTRA4P83105 476 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-213ENST00000530784 KCNAB1Q14722 419 aa8.08□□□□□ -1.12
CSDE1-213ENST00000530784 TWISTNBQ3B726 338 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-213ENST00000530784 ZNF66Q6ZN08 573 aa8.08□□□□□ -1.12
CSDE1-213ENST00000530784 RAB11FIP4Q86YS3 637 aa8.08□□□□□ -1.12
CSDE1-213ENST00000530784 SMCR8Q8TEV9 937 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-213ENST00000530784 INO80BQ9C086 356 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-213ENST00000530784 UNKQ9C0B0 810 aaKnown RBP8.08□□□□□ -1.12
CSDE1-213ENST00000530784 COA1Q9GZY4 146 aa8.08□□□□□ -1.12
CSDE1-213ENST00000530784 TBC1D23Q9NUY8 699 aa8.08□□□□□ -1.12
CSDE1-213ENST00000530784 FLRT1Q9NZU1 646 aa8.08□□□□□ -1.12
CSDE1-213ENST00000530784 AQP7P3A6NL99 342 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 RHPN2P1A8MT19 583 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 PRRT4C9JH25 899 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 FGAP02671 866 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 MYCLP12524 364 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-213ENST00000530784 NF2P35240 595 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 PIK3CBP42338 1070 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 CCT4P50991 539 aaKnown RBP8.07□□□□□ -1.12
CSDE1-213ENST00000530784 SUMO2P61956 95 aaKnown RBP8.07□□□□□ -1.12
CSDE1-213ENST00000530784 PNLDC1Q8NA58 520 aaKnown RBP8.07□□□□□ -1.12
CSDE1-213ENST00000530784 IPCEF1Q8WWN9 437 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-213ENST00000530784 CTHRC1Q96CG8 243 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 C8orf48Q96LL4 319 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 SNX18Q96RF0 628 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 FAM83DQ9H4H8 585 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 ZNF212Q9UDV6 495 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 FAM50BQ9Y247 325 aa8.07□□□□□ -1.12
CSDE1-213ENST00000530784 ZNF804BA4D1E1 1349 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 PSME4Q14997 1843 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 H7C1Q1 480 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 INMTO95050 263 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 PARP1P09874 1014 aaKnown RBP8.06□□□□□ -1.12
CSDE1-213ENST00000530784 KCNJ4P48050 445 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 RENBPP51606 427 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 ALDH5A1P51649 535 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-213ENST00000530784 GCKRQ14397 625 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 MOB2Q70IA6 237 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 G2E3Q7L622 706 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 CTU1Q7Z7A3 348 aaKnown RBP8.06□□□□□ -1.12
CSDE1-213ENST00000530784 SDR16C5Q8N3Y7 309 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 RITA1Q96K30 269 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 MPHOSPH8Q99549 860 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 MXD3Q9BW11 206 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 ANKRD2Q9GZV1 360 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 MYH16Q9H6N6 1097 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 AS3MTQ9HBK9 375 aa8.06□□□□□ -1.12
CSDE1-213ENST00000530784 GEMIN8Q9NWZ8 242 aaKnown RBP8.06□□□□□ -1.12
CSDE1-213ENST00000530784 SCAF8Q9UPN6 1271 aaKnown RBP8.06□□□□□ -1.12
CSDE1-213ENST00000530784 IL16Q14005 1332 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 UBE2Q2LH0YL09 131 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 SPRY2O43597 315 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 ANXA2P07355 339 aaKnown RBP8.05□□□□□ -1.12
CSDE1-213ENST00000530784 CYP2D6P10635 497 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 KLRK1P26718 216 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 MPGP29372 298 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 NTSR1P30989 418 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 MMP14P50281 582 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 DAG1Q14118 895 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 COBLL1Q53SF7 1204 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 KIAA1614Q5VZ46 1190 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 PTCHD4Q6ZW05 846 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 RNF44Q7L0R7 432 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 BCDIN3DQ7Z5W3 292 aaKnown RBP8.05□□□□□ -1.12
CSDE1-213ENST00000530784 SFTPA1Q8IWL2 248 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 VGLL2Q8N8G2 317 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 LINS1Q8NG48 757 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 DNAAF4Q8WXU2 420 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 WDYHV1Q96HA8 205 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 ASB2Q96Q27 587 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 MMS19Q96T76 1030 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 PNPLA8Q9NP80 782 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 CAPN11Q9UMQ6 739 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 TNFRSF18Q9Y5U5 241 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 SPEF2Q9C093 1822 aa8.05□□□□□ -1.12
CSDE1-213ENST00000530784 FANCIQ9NVI1 1328 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 TCRBV5S1A1TA0A578 114 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 DNAJC9-AS1A6NH13 148 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 IL18RAPO95256 599 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 CREB1P16220 341 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 CHRNDQ07001 517 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 CCDC184Q52MB2 194 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 TTLL5Q6EMB2 1281 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 APOBEC3FQ8IUX4 373 aaKnown RBP8.04□□□□□ -1.12
CSDE1-213ENST00000530784 METTL25Q8N6Q8 603 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 C11orf44Q8N8P7 122 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 CCDC136Q96JN2 1154 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 SARGQ9BW04 601 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 ASIC5Q9NY37 505 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 RIMKLBQ9ULI2 386 aa8.04□□□□□ -1.12
CSDE1-213ENST00000530784 COL1A1P02452 1464 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-213ENST00000530784 ZNF646O15015 1829 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-213ENST00000530784 ANKRD18BA2A2Z9 1011 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 POC1B-GALNT4F8VUJ3 575 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 M0R3H8 397 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 FOXN3O00409 490 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-213ENST00000530784 KPNA5O15131 536 aa8.03□□□□□ -1.12
CSDE1-213ENST00000530784 SLC5A1P13866 664 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms