RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 RABGAP1LQ5R372 815 aa17.42■□□□□ 0.38
SF3B2-209ENST00000530322 TTC39BQ5VTQ0 682 aaPredicted RBP17.42■□□□□ 0.38
SF3B2-209ENST00000530322 PRR23BQ6ZRT6 265 aa17.42■□□□□ 0.38
SF3B2-209ENST00000530322 RNF214Q8ND24 703 aa17.42■□□□□ 0.38
SF3B2-209ENST00000530322 SYN2Q92777 582 aaPredicted RBP17.42■□□□□ 0.38
SF3B2-209ENST00000530322 IGSF8Q969P0 613 aa17.42■□□□□ 0.38
SF3B2-209ENST00000530322 SELENOOQ9BVL4 669 aa17.42■□□□□ 0.38
SF3B2-209ENST00000530322 CFAP54Q96N23 3096 aa17.42■□□□□ 0.38
SF3B2-209ENST00000530322 ITIH6Q6UXX5 1313 aa17.42■□□□□ 0.38
SF3B2-209ENST00000530322 EP300Q09472 2414 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-209ENST00000530322 PTPRZ1P23471 2315 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-209ENST00000530322 SIGLEC16A6NMB1 481 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 H0Y626 953 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 DDX3XO00571 662 aaKnown RBP eCLIP17.41■□□□□ 0.383e-10■■■□□ 15.4
SF3B2-209ENST00000530322 GYPCP04921 128 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 TPM3P06753 285 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 GABRG2P18507 467 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 SDC4P31431 198 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 GGCXP38435 758 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 PTPN9P43378 593 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 ZBED6P86452 979 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 ATP11AP98196 1134 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 LPAL2Q16609 132 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 C15orf59Q2T9L4 293 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-209ENST00000530322 C5orf22Q49AR2 442 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 RAB6CQ53S08 254 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 SH3PXD2AQ5TCZ1 1133 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 HGSNATQ68CP4 663 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 MBLAC2Q68D91 279 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 PPP1R2P3Q6NXS1 205 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 CEP68Q76N32 757 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 C14orf80Q86SX3 495 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 CIR1Q86X95 450 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-209ENST00000530322 CCDC117Q8IWD4 279 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-209ENST00000530322 ZNF683Q8IZ20 524 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 CCAR2Q8N163 923 aaKnown RBP17.41■□□□□ 0.38
SF3B2-209ENST00000530322 CPLX3Q8WVH0 158 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 HMGB4Q8WW32 186 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 RUBCNQ92622 972 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 VCPIP1Q96JH7 1222 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 RPRD1AQ96P16 312 aaPredicted RBP17.41■□□□□ 0.38
SF3B2-209ENST00000530322 SIK2Q9H0K1 926 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 RAB6CQ9H0N0 254 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 TMPRSS4Q9NRS4 437 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 INTS6Q9UL03 887 aaKnown RBP17.41■□□□□ 0.38
SF3B2-209ENST00000530322 RAB23Q9ULC3 237 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 VANGL2Q9ULK5 521 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 RAD54BQ9Y620 910 aa17.41■□□□□ 0.38
SF3B2-209ENST00000530322 DOCK4Q8N1I0 1966 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 A0A1B0GVM2 712 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 TCAF2A6NFQ2 919 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 TMCO5BA8MYB1 307 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 DLDP09622 509 aaKnown RBP17.4■□□□□ 0.38
SF3B2-209ENST00000530322 GZMAP12544 262 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 POLR2EP19388 210 aaKnown RBP17.4■□□□□ 0.38
SF3B2-209ENST00000530322 RRM1P23921 792 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 PRKCHP24723 683 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 IRAK1P51617 712 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 PTPRNQ16849 979 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 CDO1Q16878 200 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 USP39Q53GS9 565 aaKnown RBP17.4■□□□□ 0.38
SF3B2-209ENST00000530322 PPP1R15BQ5SWA1 713 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 ARTNQ5T4W7 220 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 LAIR1Q6GTX8 287 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 DNAJC24Q6P3W2 148 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 WDR59Q6PJI9 974 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 STRADAQ7RTN6 431 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 FAM131BQ86XD5 332 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 CYB5D2Q8WUJ1 264 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 CENPIQ92674 756 aaPredicted RBP17.4■□□□□ 0.38
SF3B2-209ENST00000530322 TTC17Q96AE7 1141 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 ERLEC1Q96DZ1 483 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 C1orf74Q96LT6 269 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 TMEM245Q9H330 911 aa17.4■□□□□ 0.38
SF3B2-209ENST00000530322 KIAA1522Q9P206 1035 aaPredicted RBP17.4■□□□□ 0.38
SF3B2-209ENST00000530322 BCCIPQ9P287 314 aaKnown RBP eCLIP17.4■□□□□ 0.38
SF3B2-209ENST00000530322 LUC7L2Q9Y383 392 aaKnown RBP17.4■□□□□ 0.38
SF3B2-209ENST00000530322 ABCA7Q8IZY2 2146 aa17.39■□□□□ 0.38
SF3B2-209ENST00000530322 ZNF292O60281 2723 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 DCLK1O15075 740 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 CBFA2T2O43439 604 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 ATP5BP06576 529 aaKnown RBP17.39■□□□□ 0.37
SF3B2-209ENST00000530322 GPD1P21695 349 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 P2RY2P41231 377 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 PITRM1Q5JRX3 1037 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 ACBD5Q5T8D3 534 aaPredicted RBP17.39■□□□□ 0.37
SF3B2-209ENST00000530322 CXorf57Q6NSI4 855 aaKnown RBP17.39■□□□□ 0.37
SF3B2-209ENST00000530322 SERPINA13PQ6UXR4 307 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 KBTBD6Q86V97 674 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 DCLK2Q8N568 766 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 FAM160A2Q8N612 972 aaPredicted RBP17.39■□□□□ 0.37
SF3B2-209ENST00000530322 ZC3H10Q96K80 434 aaKnown RBP17.39■□□□□ 0.37
SF3B2-209ENST00000530322 HAPLN3Q96S86 360 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 NCDNQ9UBB6 729 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 PLA2G4CQ9UP65 541 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 INVSQ9Y283 1065 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.39■□□□□ 0.378e-10■■□□□ 14.5
SF3B2-209ENST00000530322 SNX10Q9Y5X0 201 aa17.39■□□□□ 0.37
SF3B2-209ENST00000530322 BZW2Q9Y6E2 419 aaKnown RBP17.39■□□□□ 0.37
SF3B2-209ENST00000530322 SDK1Q7Z5N4 2213 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms