RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CSPG5O95196 566 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 FSHBP01225 129 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 URODP06132 367 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 ODC1P11926 461 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 GDF5P43026 501 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 COPB1P53618 953 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 NOP14P78316 857 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 TRPC3Q13507 836 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 SMC1AQ14683 1233 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 SOWAHAQ2M3V2 549 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 PRR31Q5SQ13 230 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 WSCD1Q658N2 575 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 VHLLQ6RSH7 139 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 PRSS55Q6UWB4 352 aaPredicted RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 DSTYKQ6XUX3 929 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 ADGRD2Q7Z7M1 963 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 GAS2L3Q86XJ1 694 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 PDCL2Q8N4E4 241 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 MRPL43Q8N983 215 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 RIN2Q8WYP3 895 aaPredicted RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 NDST4Q9H3R1 872 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 SMYD3Q9H7B4 428 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 RAB20Q9NX57 234 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 MAGEC2Q9UBF1 373 aaPredicted RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 PUF60Q9UHX1 559 aaKnown RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 TIMM13Q9Y5L4 95 aaPredicted RBP9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 SNX9Q9Y5X1 595 aa9.32□□□□□ -0.92
CCDC90B-217ENST00000530253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 LGALS16A8MUM7 142 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 GABRDO14764 452 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 TEX28O15482 410 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 HCRTO43612 131 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 TACC1O75410 805 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 CNPP09543 421 aaKnown RBP9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 RPL11P62913 178 aaKnown RBP9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 MYO1EQ12965 1108 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 PSMD5Q16401 504 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 PTPROQ16827 1216 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 DUSP6Q16828 381 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 SGSM1Q2NKQ1 1148 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 WDR72Q3MJ13 1102 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 TCEAL5Q5H9L2 206 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 ZNF667Q5HYK9 610 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 MBLAC2Q68D91 279 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 SLC8B1Q6J4K2 584 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 KRTAP5-3Q6L8H2 238 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 DPH6Q7L8W6 267 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 MILR1Q7Z6M3 343 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 CEP57Q86XR8 500 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 ADGRF2Q8IZF7 708 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 FAM26EQ8N5C1 309 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 UBR7Q8N806 425 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 APPL2Q8NEU8 664 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 OR10T2Q8NGX3 314 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 SPATA18Q8TC71 538 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 KLHL5Q96PQ7 755 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 PKMYT1Q99640 499 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 CLSTN3Q9BQT9 956 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 MRPL45Q9BRJ2 306 aaKnown RBP9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 SSBP3Q9BWW4 388 aaPredicted RBP9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 INTS2Q9H0H0 1204 aaKnown RBP9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 SIX2Q9NPC8 291 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 ENTPD7Q9NQZ7 604 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 FNIP2Q9P278 1114 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 FBXL5Q9UKA1 691 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 TSC22D4Q9Y3Q8 395 aa9.31□□□□□ -0.92
CCDC90B-217ENST00000530253 BECN2A8MW95 431 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 DDX3XO00571 662 aaKnown RBP eCLIP9.3□□□□□ -0.922e-15■■■■■ 36.8
CCDC90B-217ENST00000530253 SCAMP3O14828 347 aaKnown RBP9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 CLASP2O75122 1294 aaKnown RBP9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 VNN2O95498 520 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 CXCL14O95715 111 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 FAM163BP0C2L3 166 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 RPL17P18621 184 aaKnown RBP9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 SLC9A1P19634 815 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 WARSP23381 471 aaKnown RBP9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 KCNQ1P51787 676 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 CDH8P55286 799 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 TNNC1P63316 161 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 APBA1Q02410 837 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 YWHAHQ04917 246 aaPredicted RBP9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 INCA1Q0VD86 236 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 HYAL1Q12794 435 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 KCNC3Q14003 757 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 CCDC142Q17RM4 750 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 TRIM65Q6PJ69 517 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 SCARA5Q6ZMJ2 495 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 ANKS3Q6ZW76 656 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 ARHGEF19Q8IW93 802 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 TMEM86AQ8N2M4 240 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 VN1R2Q8NFZ6 395 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 SLC22A17Q8WUG5 538 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 KAT5Q92993 513 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 FAXDC2Q96IV6 333 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 SORCS2Q96PQ0 1159 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 TMEM209Q96SK2 561 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 CRACR2AQ9BSW2 395 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 VPS16Q9H269 839 aa9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.3□□□□□ -0.92
CCDC90B-217ENST00000530253 MRPL17Q9NRX2 175 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms