RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 RAB12Q6IQ22 244 aa12.92□□□□□ -0.34
PDE4DIP-227ENST00000529945 PHC3Q8NDX5 983 aa12.92□□□□□ -0.34
PDE4DIP-227ENST00000529945 NSUN7Q8NE18 718 aaKnown RBP12.92□□□□□ -0.34
PDE4DIP-227ENST00000529945 OR5T3Q8NGG3 340 aa12.92□□□□□ -0.34
PDE4DIP-227ENST00000529945 CYP4F12Q9HCS2 524 aa12.92□□□□□ -0.34
PDE4DIP-227ENST00000529945 USP17L12C9JPN9 530 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 USP17L21D6R901 530 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 TMEM237Q96Q45 408 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 IFT46Q9NQC8 304 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 TOPORSQ9NS56 1045 aaPredicted RBP12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 NKIRAS2Q9NYR9 191 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 TMEM114B3SHH9 223 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 PRPF3O43395 683 aaKnown RBP12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 VNN2O95498 520 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 CYP2C8P10632 490 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 GLRBP48167 497 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 PIK3CGP48736 1102 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 RNF151Q2KHN1 245 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 PCID2Q5JVF3 399 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 MFSD14BQ5SR56 506 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 CYP2R1Q6VVX0 501 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 REXO1L1PQ8IX06 675 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 KIAA1586Q9HCI6 787 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 UHRF1BP1Q6BDS2 1440 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 ACSL4O60488 711 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 PLEKHA8P1O95397 391 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 TGM3Q08188 693 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 SLCO6A1Q86UG4 719 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 PYDC1Q8WXC3 89 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 RFFLQ8WZ73 363 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 ZIM3Q96PE6 472 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 IRF2BPLQ9H1B7 796 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 POTEMA6NI47 508 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 PER1O15534 1290 aaPredicted RBP12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 RTN2O75298 545 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 CDC25AP30304 524 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 POTEHQ6S545 545 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 POTEGQ6S5H5 508 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 MTSS1LQ765P7 747 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 ARMC8Q8IUR7 673 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 GLYCTKQ8IVS8 523 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 PEX5LQ8IYB4 626 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 ZNF567Q8N184 647 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 BPIFA3Q9BQP9 254 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 GPATCH1Q9BRR8 931 aaKnown RBP12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 HOXC10Q9NYD6 342 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 UBP1Q9NZI7 540 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 CDH9Q9ULB4 789 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 GCC2Q8IWJ2 1684 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 WDR19Q8NEZ3 1342 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 CASKO14936 926 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 SGTAO43765 313 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 PLCZ1Q86YW0 608 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 KCNB2Q92953 911 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 TRIM9Q9C026 710 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 CRLS1Q9UJA2 301 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 DMTF1Q9Y222 760 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 COMMD3-BMI1R4GMX3 469 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 PRKCBP05771 671 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 SERPINF2P08697 491 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 VAMP7P51809 220 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 CYP4F8P98187 520 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 SSX6Q7RTT6 188 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 NIM1KQ8IY84 436 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 SETD6Q8TBK2 473 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 CD300LFQ8TDQ1 290 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 DHRS1Q96LJ7 313 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 SENP2Q9HC62 589 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 UPB1Q9UBR1 384 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 ZNF639Q9UID6 485 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 SCN8AQ9UQD0 1980 aa12.91□□□□□ -0.34
PDE4DIP-227ENST00000529945 DNTTP04053 509 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 ASPRV1Q53RT3 343 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 USP51Q70EK9 711 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 CCDC74BQ96LY2 380 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 SSX3Q99909 188 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 STN1Q9H668 368 aaKnown RBP12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 SEMA3EO15041 775 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 CCNDBP1O95273 360 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 SDC2P34741 201 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 GNA13Q14344 377 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 GXYLT1Q4G148 440 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 LRRC34Q8IZ02 419 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 ZNF354BQ96LW1 612 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 GABBR1Q9UBS5 961 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 RAD54BQ9Y620 910 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 PHACTR4Q8IZ21 702 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 UCMAQ8WVF2 138 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 ATL1Q8WXF7 558 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 MCEEQ96PE7 176 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 RNF38Q9H0F5 515 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 GGA3Q9NZ52 723 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 HPCAL1P37235 193 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 NR6A1Q15406 480 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 EEPD1Q7L9B9 569 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 LINC00523Q86TU6 105 aa12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 BHLHE22Q8NFJ8 381 aaPredicted RBP12.9□□□□□ -0.34
PDE4DIP-227ENST00000529945 SGCDQ92629 289 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms