RNA–Protein interactions for RNA: ENST00000529565.1

CASP4-207, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 4,745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-207ENST00000529565 THOC1Q96FV9 657 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 FUBP3Q96I24 572 aaKnown RBP eCLIP4.8□□□□□ -1.64
CASP4-207ENST00000529565 MAGEB18Q96M61 343 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 CPXM1Q96SM3 734 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 TBL1YQ9BQ87 522 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ABCF3Q9NUQ8 709 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 RNF19AQ9NV58 838 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 ETNK2Q9NVF9 386 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 CD274Q9NZQ7 290 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 AFF4Q9UHB7 1163 aaKnown RBP4.8□□□□□ -1.64
CASP4-207ENST00000529565 SQORQ9Y6N5 450 aa4.8□□□□□ -1.64
CASP4-207ENST00000529565 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 TRPC5OSA6NMA1 111 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 SUPT3HB4E1H0 165 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 SUPT3HO75486 399 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 VNN1O95497 513 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 STAU1O95793 577 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 KCNE1P15382 129 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 HNRNPH2P55795 449 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 TAS2R40P59535 323 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ITGA9Q13797 1035 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 NAA25Q14CX7 972 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 THEMIS2Q5TEJ8 643 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 TAPT1Q6NXT6 567 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 STRA8Q7Z7C7 330 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 SAPCD2Q86UD0 394 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 CDC26Q8NHZ8 85 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 PPWD1Q96BP3 646 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 ZFP42Q96MM3 310 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 CPNE1Q99829 537 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 IL22Q9GZX6 179 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 CLPBQ9H078 707 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 APOBEC3GQ9HC16 384 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 IARS2Q9NSE4 1012 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 RIC8BQ9NVN3 520 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 NINJ2Q9NZG7 142 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 CNTN3Q9P232 1028 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ACOT9Q9Y305 439 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 SLC4A7Q9Y6M7 1214 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ADGRA3Q8IWK6 1321 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 IGKV6D-21A0A0A0MT36 114 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 SYCE1LA8MT33 242 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 CLDN5O00501 218 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 MDM4O15151 490 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ATP5BP06576 529 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 KRT16P08779 473 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 HDCP19113 662 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ADRA1BP35368 520 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ASPAP45381 313 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 PPP3CCP48454 512 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 CD151P48509 253 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 POLR2LP62875 67 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 DUPD1Q68J44 220 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 DSG4Q86SJ6 1040 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ECHDC2Q86YB7 292 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 SLC9A7Q96T83 725 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 KLF6Q99612 283 aaPredicted RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 TACO1Q9BSH4 297 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 GOLGA2P5Q9HBQ8 144 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 PCDH18Q9HCL0 1135 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ALG13Q9NP73 1137 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 SMPD4Q9NXE4 827 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ORC6Q9Y5N6 252 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 MYH6P13533 1939 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 A0A0U1RQF3 1178 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 SLCO1B7G3V0H7 640 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 KCNK1O00180 336 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 GNGT2O14610 69 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 DDX3YO15523 660 aaKnown RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 MEFVO15553 781 aaPredicted RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 TLR5O60602 858 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ESRRBO95718 433 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 FGBP02675 491 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 PYGBP11216 843 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 CRABP2P29373 138 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 OR1D2P34982 312 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 AARSP49588 968 aaKnown RBP eCLIP4.79□□□□□ -1.64
CASP4-207ENST00000529565 CLCNKBP51801 687 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 DNAL1Q4LDG9 190 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 FUT10Q6P4F1 479 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 FAM228AQ86W67 206 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 PALB2Q86YC2 1186 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 CRYBG2Q8N1P7 616 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 LRRC57Q8N9N7 239 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ARMC2Q8NEN0 867 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 JOSD2Q8TAC2 188 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 HDAC7Q8WUI4 952 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ALG3Q92685 438 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ART4Q93070 314 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 BHMTQ93088 406 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ILKAPQ9H0C8 392 aaPredicted RBP4.79□□□□□ -1.64
CASP4-207ENST00000529565 RAD18Q9NS91 495 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 PKD2L2Q9NZM6 624 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 NAALADL1Q9UQQ1 740 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 CDYLQ9Y232 598 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 ANKRD6Q9Y2G4 727 aa4.79□□□□□ -1.64
CASP4-207ENST00000529565 DNAJC25-GNG10A0A024R161 153 aa4.78□□□□□ -1.64
CASP4-207ENST00000529565 A0A0U1RQJ8 604 aa4.78□□□□□ -1.64
CASP4-207ENST00000529565 TLL1O43897 1013 aa4.78□□□□□ -1.64
CASP4-207ENST00000529565 LZTS3O60299 673 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms