RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ATICP31939 592 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 MAP2K2P36507 400 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 EPS15P42566 896 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 CALD1Q05682 793 aaKnown RBP5.5□□□□□ -1.53
CSDE1-212ENST00000529046 CXCL9Q07325 125 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 CYP1B1Q16678 543 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 PROSER3Q2NL68 480 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 TSTD2Q5T7W7 516 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 RAP1GAP2Q684P5 730 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 ABLIM2Q6H8Q1 611 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 ANKRD16Q6P6B7 361 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 MTHFD1LQ6UB35 978 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 CRTC1Q6UUV9 634 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 USP49Q70CQ1 688 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 ZNF551Q7Z340 670 aaPredicted RBP5.5□□□□□ -1.53
CSDE1-212ENST00000529046 CCDC28AQ8IWP9 274 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 TXLNBQ8N3L3 684 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 ZNF566Q969W8 418 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 LRRC46Q96FV0 321 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 ISCA1Q9BUE6 129 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 ZCWPW1Q9H0M4 648 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 RXFP3Q9NSD7 469 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 DLL3Q9NYJ7 618 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 TRMT112Q9UI30 125 aaKnown RBP5.5□□□□□ -1.53
CSDE1-212ENST00000529046 CA14Q9ULX7 337 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 DRG1Q9Y295 367 aaKnown RBP5.5□□□□□ -1.53
CSDE1-212ENST00000529046 DAAM1Q9Y4D1 1078 aa5.5□□□□□ -1.53
CSDE1-212ENST00000529046 ABCC4O15439 1325 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 LINC00473A8K010 186 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 GCOM1H8Y6P7 765 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-212ENST00000529046 PPIP5K2O43314 1243 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 CA12O43570 354 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 LDHAP00338 332 aaKnown RBP5.49□□□□□ -1.53
CSDE1-212ENST00000529046 FESP07332 822 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 WT1P19544 449 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-212ENST00000529046 RPS12P25398 132 aaKnown RBP5.49□□□□□ -1.53
CSDE1-212ENST00000529046 MMP14P50281 582 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 GATMP50440 423 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 PGDP52209 483 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 EIF2B5Q13144 721 aaKnown RBP5.49□□□□□ -1.53
CSDE1-212ENST00000529046 ATP1A4Q13733 1029 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 RAB30Q15771 203 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 PLAC9Q5JTB6 97 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 CST9Q5W186 159 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 ZKSCAN2Q63HK3 967 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 ARL6IP4Q66PJ3 421 aaKnown RBP5.49□□□□□ -1.53
CSDE1-212ENST00000529046 SARAFQ96BY9 339 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 C18orf8Q96DM3 657 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 WDYHV1Q96HA8 205 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 DTNAQ9Y4J8 743 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 COL4A5P29400 1685 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 ANKRD36CQ5JPF3 1778 aa5.49□□□□□ -1.53
CSDE1-212ENST00000529046 ZNF609O15014 1411 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 A8MVJ9 347 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 RGS10O43665 173 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 RBMXL2O75526 392 aaKnown RBP5.48□□□□□ -1.53
CSDE1-212ENST00000529046 PRKCBP05771 671 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 IDEP14735 1019 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 GKP32189 559 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 TECP42680 631 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 ALDH9A1P49189 494 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 CLCN2P51788 898 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 SOX10P56693 466 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 TNFAIP2Q03169 654 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 WDR43Q15061 677 aaKnown RBP eCLIP5.48□□□□□ -1.53
CSDE1-212ENST00000529046 ACOX1Q15067 660 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.48□□□□□ -1.53
CSDE1-212ENST00000529046 FAM83BQ5T0W9 1011 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 FAXCQ5TGI0 409 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 Q6ZWC4 215 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 PARS2Q7L3T8 475 aaKnown RBP5.48□□□□□ -1.53
CSDE1-212ENST00000529046 CAND1Q86VP6 1230 aaKnown RBP5.48□□□□□ -1.53
CSDE1-212ENST00000529046 RAB11FIP4Q86YS3 637 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 SYTL1Q8IYJ3 562 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 CCDC191Q8NCU4 936 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 SUN3Q8TAQ9 357 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 R3HDM4Q96D70 268 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 ZBTB45Q96K62 511 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-212ENST00000529046 EYA3Q99504 573 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 CRB3Q9BUF7 120 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 FSD1LQ9BXM9 530 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 PCDHAC1Q9H158 963 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 SLC25A32Q9H2D1 315 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 PRKRIP1Q9H875 184 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-212ENST00000529046 ARHGEF3Q9NR81 526 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 DUSP22Q9NRW4 184 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 CDC23Q9UJX2 597 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 ZMYND8Q9ULU4 1186 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-212ENST00000529046 FRMD4BQ9Y2L6 1034 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 TNFRSF18Q9Y5U5 241 aa5.48□□□□□ -1.53
CSDE1-212ENST00000529046 CACNA1SQ13698 1873 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 YDJCA8MPS7 323 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 H0YIZ8 118 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 PODXLO00592 558 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 FFAR2O15552 330 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 VNN1O95497 513 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 TTLL1O95922 423 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 PCCAP05165 728 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-212ENST00000529046 NR2F6P10588 404 aa5.47□□□□□ -1.53
CSDE1-212ENST00000529046 RBL1P28749 1068 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms