RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 STIM2Q9P246 746 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 TSPAN16Q9UKR8 245 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 FZD4Q9ULV1 537 aa12.01□□□□□ -0.49
CMTM1-211ENST00000528484 TP53BP1Q12888 1972 aaPredicted RBP12□□□□□ -0.49
CMTM1-211ENST00000528484 TEX51A0A1B0GUA7 166 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 A0A1W2PP55 124 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 MID1O15344 667 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 ACTN4O43707 911 aaKnown RBP12□□□□□ -0.49
CMTM1-211ENST00000528484 SIN3BO75182 1162 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 ADH1BP00325 375 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 ACTN2P35609 894 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 NNMTP40261 264 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 GALCP54803 685 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 TARDBPQ13148 414 aaKnown RBP eCLIP12□□□□□ -0.49
CMTM1-211ENST00000528484 DNAJC3Q13217 504 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 HNRNPA1L2Q32P51 320 aaKnown RBP12□□□□□ -0.49
CMTM1-211ENST00000528484 KIAA0907Q7Z7F0 614 aaPredicted RBP12□□□□□ -0.49
CMTM1-211ENST00000528484 MMAAQ8IVH4 418 aaKnown RBP12□□□□□ -0.49
CMTM1-211ENST00000528484 DHX40Q8IX18 779 aaKnown RBP12□□□□□ -0.49
CMTM1-211ENST00000528484 KDM1BQ8NB78 822 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 SERAC1Q96JX3 654 aa12□□□□□ -0.49
CMTM1-211ENST00000528484 EDDM13A0A1B0GTR0 161 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 TARSL2A2RTX5 802 aaKnown RBP11.99□□□□□ -0.49
CMTM1-211ENST00000528484 YJEFN3A6XGL0 299 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 E7ENQ6 273 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 CETN3O15182 167 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 MSI1O43347 362 aaKnown RBP11.99□□□□□ -0.49
CMTM1-211ENST00000528484 ACSL4O60488 711 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 ZIC2O95409 532 aaPredicted RBP11.99□□□□□ -0.49
CMTM1-211ENST00000528484 PRB1P04280 392 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 ZSCAN22P10073 491 aaPredicted RBP11.99□□□□□ -0.49
CMTM1-211ENST00000528484 LCP1P13796 627 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 ITPKBP27987 946 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 EPHA8P29322 1005 aaPredicted RBP11.99□□□□□ -0.49
CMTM1-211ENST00000528484 SLC8A1P32418 973 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 CD70P32970 193 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 NUDT1P36639 197 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 CSKP41240 450 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 ACADVLP49748 655 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 CCR5P51681 352 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 TBX4P57082 545 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 NUCB2P80303 420 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 RTP5Q14D33 572 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 KCNT1Q5JUK3 1230 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 PIK3R6Q5UE93 754 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 BROXQ5VW32 411 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 TCERG1LQ5VWI1 586 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 RFWD3Q6PCD5 774 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 GPR155Q7Z3F1 870 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 PRPF39Q86UA1 669 aaKnown RBP11.99□□□□□ -0.49
CMTM1-211ENST00000528484 CARNMT1Q8N4J0 409 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 OR14C36Q8NHC7 312 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 SNIP1Q8TAD8 396 aaKnown RBP11.99□□□□□ -0.49
CMTM1-211ENST00000528484 FIBINQ8TAL6 211 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 SAP25Q8TEE9 199 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 NDRG1Q92597 394 aaKnown RBP11.99□□□□□ -0.49
CMTM1-211ENST00000528484 FGF11Q92914 225 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 TATDN2Q93075 761 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 TTC17Q96AE7 1141 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 NEUROG2Q9H2A3 272 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 PRORYQ9H606 182 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 ADAMTS1Q9UHI8 967 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 KIAA1257Q9ULG3 409 aa11.99□□□□□ -0.49
CMTM1-211ENST00000528484 MUC22E2RYF6 1773 aaPredicted RBP11.99□□□□□ -0.49
CMTM1-211ENST00000528484 PLXNA2O75051 1894 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TBC1D3DA0A087WVF3 549 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TBC1D3IA0A087WXS9 549 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TBC1D3EA0A087X179 549 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TBC1D3KA0A087X1G2 549 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TBC1D3FA6NER0 549 aaPredicted RBP11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TBC1D3LB9A6J9 549 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TLR4O00206 839 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 F13A1P00488 732 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 SRPRAP08240 638 aaKnown RBP11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TBC1D3HP0C7X1 549 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 VDRP11473 427 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 PFKFB1P16118 471 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 GOT1P17174 413 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 CKMT2P17540 419 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 C5AR1P21730 350 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 GLDCP23378 1020 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 PSMD8P48556 350 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 DCAF17Q5H9S7 520 aaPredicted RBP11.98□□□□□ -0.49
CMTM1-211ENST00000528484 PRAMEF14Q5SWL7 426 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TBC1D3GQ6DHY5 549 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TBC1D3CQ6IPX1 549 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 MSANTD2Q6P1R3 559 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 DSG4Q86SJ6 1040 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 TBC1D3Q8IZP1 549 aaPredicted RBP11.98□□□□□ -0.49
CMTM1-211ENST00000528484 GUF1Q8N442 669 aaKnown RBP11.98□□□□□ -0.49
CMTM1-211ENST00000528484 KCTD13Q8WZ19 329 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 IRGQQ8WZA9 623 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 AZIN2Q96A70 460 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 SERPINB11Q96P15 392 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 LGMNQ99538 433 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 ORAI3Q9BRQ5 295 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 ERVMER34-1Q9H9K5 563 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 CLCA2Q9UQC9 943 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 MAPK8IP1Q9UQF2 711 aa11.98□□□□□ -0.49
CMTM1-211ENST00000528484 ATMQ13315 3056 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms