RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ZDHHC17Q8IUH5 632 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 ZNF557Q8N988 423 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-213ENST00000527897 FIBINQ8TAL6 211 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 PRCCQ92733 491 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-213ENST00000527897 RTKNQ9BST9 563 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 EDEM2Q9BV94 578 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 IRX2Q9BZI1 471 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-213ENST00000527897 SIK2Q9H0K1 926 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 CKAP5Q14008 2032 aa16.07■□□□□ 0.16
CAPN1-213ENST00000527897 SLC30A4O14863 429 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 MOCS3O95396 460 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 LSM8O95777 96 aaKnown RBP16.06■□□□□ 0.16
CAPN1-213ENST00000527897 ZNF18P17022 549 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 TFE3P19532 575 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-213ENST00000527897 CDH5P33151 784 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-213ENST00000527897 CSKP41240 450 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 MATKP42679 507 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 ST8SIA6P61647 398 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 NOMO3P69849 1222 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 DEUP1Q05D60 604 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 RABGAP1LQ5R372 815 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 STPG1Q5TH74 334 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 RNF43Q68DV7 783 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 SND1Q7KZF4 910 aaKnown RBP eCLIP16.06■□□□□ 0.16
CAPN1-213ENST00000527897 KIAA0907Q7Z7F0 614 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-213ENST00000527897 XYLT1Q86Y38 959 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 ZNF397Q8NF99 534 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-213ENST00000527897 HSPA12BQ96MM6 686 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 RPRD1AQ96P16 312 aaPredicted RBP16.06■□□□□ 0.16
CAPN1-213ENST00000527897 SEPT11Q9NVA2 429 aaKnown RBP16.06■□□□□ 0.16
CAPN1-213ENST00000527897 NOCTQ9UK39 431 aaKnown RBP16.06■□□□□ 0.16
CAPN1-213ENST00000527897 VANGL2Q9ULK5 521 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 STAP1Q9ULZ2 295 aa16.06■□□□□ 0.16
CAPN1-213ENST00000527897 TNRC6BQ9UPQ9 1833 aaKnown RBP16.05■□□□□ 0.16
CAPN1-213ENST00000527897 CFIP05156 583 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 COPAP53621 1224 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 JAM2P57087 298 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 CDR2Q01850 454 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 CENPCQ03188 943 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 ZNF33AQ06730 810 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 EIF4EBP2Q13542 120 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-213ENST00000527897 PTPRNQ16849 979 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 TRIM61Q5EBN2 209 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 PITRM1Q5JRX3 1037 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 FAM124AQ86V42 546 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 ZNF677Q86XU0 584 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 SYT12Q8IV01 421 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 RGL4Q8IZJ4 473 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 OR2T3Q8NH03 318 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 SLC30A5Q8TAD4 765 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 TBCBQ99426 244 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 HSD3B7Q9H2F3 369 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 TMEM245Q9H330 911 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 MTG2Q9H4K7 406 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 PIGVQ9NUD9 493 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 TMEM74BQ9NUR3 256 aa16.05■□□□□ 0.16
CAPN1-213ENST00000527897 KIAA1522Q9P206 1035 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-213ENST00000527897 INTS6Q9UL03 887 aaKnown RBP16.05■□□□□ 0.16
CAPN1-213ENST00000527897 MUC22E2RYF6 1773 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-213ENST00000527897 LNP1A1A4G5 178 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 PAGE1O75459 146 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 PDGFRAP16234 1089 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 CD6P30203 668 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 CTSOP43234 321 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-213ENST00000527897 GABRB2P47870 512 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 TPMTP51580 245 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 IRX4P78413 519 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 FMO1Q01740 532 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 AUHQ13825 339 aaKnown RBP16.04■□□□□ 0.16
CAPN1-213ENST00000527897 SPDYCQ5MJ68 293 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 OTUD1Q5VV17 481 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-213ENST00000527897 RNF219Q5W0B1 726 aaPredicted RBP16.04■□□□□ 0.16
CAPN1-213ENST00000527897 FBXL22Q6P050 247 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 APCDD1Q8J025 514 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 CCAR2Q8N163 923 aaKnown RBP16.04■□□□□ 0.16
CAPN1-213ENST00000527897 TOE1Q96GM8 510 aaKnown RBP16.04■□□□□ 0.16
CAPN1-213ENST00000527897 LMLNQ96KR4 655 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 NPY6RQ99463 290 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 PRMT1Q99873 361 aaKnown RBP16.04■□□□□ 0.16
CAPN1-213ENST00000527897 C11orf70Q9BRQ4 267 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 GPR174Q9BXC1 333 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 NUSAP1Q9BXS6 441 aaKnown RBP16.04■□□□□ 0.16
CAPN1-213ENST00000527897 ADAM33Q9BZ11 813 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 TKTL2Q9H0I9 626 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 WDCPQ9H6R7 721 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 METTL5Q9NRN9 209 aaKnown RBP16.04■□□□□ 0.16
CAPN1-213ENST00000527897 RRN3Q9NYV6 651 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 SNX10Q9Y5X0 201 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 HS3ST4Q9Y661 456 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 PI4KAP42356 2102 aa16.04■□□□□ 0.16
CAPN1-213ENST00000527897 MED19A0JLT2 244 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-213ENST00000527897 SMTNL1A8MU46 457 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 MEI4A8MW99 385 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 ADCY5O95622 1261 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 ASLP04424 464 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 CHRNB2P17787 502 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 FLT3P36888 993 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 ZNF165P49910 485 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 FOXK2Q01167 660 aa16.03■□□□□ 0.16
CAPN1-213ENST00000527897 CAMK2GQ13555 558 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms