RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 CCNI2Q6ZMN8 369 aaPredicted RBP18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ADAT2Q7Z6V5 191 aaKnown RBP18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 EHBP1Q8NDI1 1231 aa18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CLEC4CQ8WTT0 213 aa18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ERCC4Q92889 916 aaPredicted RBP18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 BIRC7Q96CA5 298 aa18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 SLC39A13Q96H72 371 aa18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 LMLNQ96KR4 655 aa18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 PRICKLE1Q96MT3 831 aaPredicted RBP18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ZSWIM1Q9BR11 485 aa18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ST7Q9NRC1 585 aa18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 MAN1B1Q9UKM7 699 aa18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 FZD4Q9ULV1 537 aa18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CNTN6Q9UQ52 1028 aa18.13■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 PKD1L2Q7Z442 2459 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 TMEM131Q92545 1883 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 GOLGA6L7A0A1B0GV03 622 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 PAPSS1O43252 624 aaPredicted RBP18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 PCDHGA12O60330 932 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 LUC7L3O95232 432 aaKnown RBP18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 FGFR1OPO95684 399 aaKnown RBP18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 AFPP02771 609 aaKnown RBP18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 GPD2P43304 727 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 RACK1P63244 317 aaKnown RBP18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 SCAPQ12770 1279 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 NUMA1Q14980 2115 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 KIF19Q2TAC6 998 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 RNF219Q5W0B1 726 aaPredicted RBP18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 KIAA0895LQ68EN5 471 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 SMYD5Q6GMV2 418 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 RRAGAQ7L523 313 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ENOSF1Q7L5Y1 443 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 TRIM59Q8IWR1 403 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 GALNT15Q8N3T1 639 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CARNMT1Q8N4J0 409 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 GANCQ8TET4 914 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 NELFBQ8WX92 580 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 KAT5Q92993 513 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 MYO19Q96H55 970 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 TJP2Q9UDY2 1190 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 SNX11Q9Y5W9 270 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ITIH6Q6UXX5 1313 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ZZEF1O43149 2961 aa18.12■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 PTPRBP23467 1997 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 TP53BP1Q12888 1972 aaPredicted RBP18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 EDDM13A0A1B0GTR0 161 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 LRRC72A6NJI9 287 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 DKK1O94907 266 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 KRT5P13647 590 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CD44P16070 742 aaKnown RBP18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 C21orf59P57076 290 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 RPS24P62847 133 aaKnown RBP18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 KCNH2Q12809 1159 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 MTA1Q13330 715 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 SLC12A1Q13621 1099 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 PITRM1Q5JRX3 1037 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 TTC39BQ5VTQ0 682 aaPredicted RBP18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 KLHL10Q6JEL2 608 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 TMPRSS7Q7RTY8 843 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 SLCO6A1Q86UG4 719 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ARHGEF19Q8IW93 802 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 SCUBE3Q8IX30 993 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 PNPLA1Q8N8W4 532 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 BTN2A3PQ96KV6 586 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 MED15Q96RN5 788 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ACE2Q9BYF1 805 aaPredicted RBP18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 NUCKS1Q9H1E3 243 aaKnown RBP18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CCDC86Q9H6F5 360 aaKnown RBP18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 POPDC2Q9HBU9 364 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 FBXL12Q9NXK8 326 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ADAMTS1Q9UHI8 967 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 SLC12A6Q9UHW9 1150 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 LHX6Q9UPM6 363 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CTNND2Q9UQB3 1225 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ERVW-1Q9UQF0 538 aa18.11■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 A0A1W2PPC4 97 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 TNFSF14O43557 240 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 SIN3BO75182 1162 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 MOCS2O96007 188 aaPredicted RBP18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CAPNS1P04632 268 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 FYNP06241 537 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 NNMTP40261 264 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CTSKP43235 329 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 OXCT1P55809 520 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 PAK1Q13153 545 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CST6Q15828 149 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 TAC4Q86UU9 113 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CHSY1Q86X52 802 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 ATP6V0D2Q8N8Y2 350 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 OR2T34Q8NGX1 318 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 MRGPRX3Q96LB0 322 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 SLC4A5Q9BY07 1137 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 INTS2Q9H0H0 1204 aaKnown RBP18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 INTS6Q9UL03 887 aaKnown RBP18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 NAALADL1Q9UQQ1 740 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 CEP83Q9Y592 693 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 WDFY3Q8IZQ1 3526 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 PLXNB3Q9ULL4 1909 aa18.1■□□□□ 0.49
CKLF-CMTM1-202ENST00000527845 COL5A1P20908 1838 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms