RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 PRAMEF26H0Y7S4 382 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 PENKP01210 267 aaPredicted RBP7.28□□□□□ -1.24
VPS26B-204ENST00000527586 MS4A1P11836 297 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 CCL4P13236 92 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 BDNFP23560 247 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 HTR1EP28566 365 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 PGDP52209 483 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 NOP14P78316 857 aaKnown RBP7.28□□□□□ -1.24
VPS26B-204ENST00000527586 ZFP36L1Q07352 338 aaKnown RBP7.28□□□□□ -1.24
VPS26B-204ENST00000527586 PTK2BQ14289 1009 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 CST6Q15828 149 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 JMJD6Q6NYC1 403 aaPredicted RBP7.28□□□□□ -1.24
VPS26B-204ENST00000527586 PHC2Q8IXK0 858 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 UNC5BQ8IZJ1 945 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 SDR16C5Q8N3Y7 309 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 HAS1Q92839 578 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 PMEPA1Q969W9 287 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 SNRNP40Q96DI7 357 aaKnown RBP7.28□□□□□ -1.24
VPS26B-204ENST00000527586 IFT43Q96FT9 208 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 CEP295NLQ96MC4 621 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 IL12RB2Q99665 862 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 MYOCQ99972 504 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 BOCQ9BWV1 1114 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 LRRC2Q9BYS8 371 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 CPEB1Q9BZB8 566 aaKnown RBP7.28□□□□□ -1.24
VPS26B-204ENST00000527586 NACA2Q9H009 215 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 IL25Q9H293 177 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 MTG2Q9H4K7 406 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 ASF1BQ9NVP2 202 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 MAGEC2Q9UBF1 373 aaPredicted RBP7.28□□□□□ -1.24
VPS26B-204ENST00000527586 CYTH4Q9UIA0 394 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 RABGEF1Q9UJ41 708 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 CLEC4EQ9ULY5 219 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 CSNK1G3Q9Y6M4 447 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 MXRA5Q9NR99 2828 aa7.28□□□□□ -1.24
VPS26B-204ENST00000527586 CCDC169A6NNP5 214 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 H3BM21 787 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 AQP9O43315 295 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 KCNAB3O43448 404 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 HCRTO43612 131 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 RNASEH1O60930 286 aaKnown RBP7.27□□□□□ -1.25
VPS26B-204ENST00000527586 ATP2C2O75185 946 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 DNAJB5O75953 348 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 CLTAP09496 248 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 XRCC6P12956 609 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS26B-204ENST00000527586 CYP11B2P19099 503 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 NUDT1P36639 197 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 TLE4Q04727 773 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 CDK18Q07002 472 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 C1QBPQ07021 282 aaKnown RBP7.27□□□□□ -1.25
VPS26B-204ENST00000527586 FYB2Q5VWT5 728 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 VSTM1Q6UX27 236 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 C4orf50Q6ZRC1 276 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 SND1Q7KZF4 910 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS26B-204ENST00000527586 TAS1R3Q7RTX0 852 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 RD3Q7Z3Z2 195 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 CATSPER3Q86XQ3 398 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 PDCL2Q8N4E4 241 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 OR13H1Q8NG92 308 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 LMX1AQ8TE12 382 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 CCDC74AQ96AQ1 378 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 FAM212AQ96EL1 285 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 TAAR9Q96RI9 348 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 SRRTQ9BXP5 876 aaKnown RBP7.27□□□□□ -1.25
VPS26B-204ENST00000527586 C22orf23Q9BZE7 217 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 CCSER1Q9C0I3 900 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 LRRN3Q9H3W5 708 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 MCCC2Q9HCC0 563 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 SUN2Q9UH99 717 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 CHORDC1Q9UHD1 332 aaPredicted RBP7.27□□□□□ -1.25
VPS26B-204ENST00000527586 LSM7Q9UK45 103 aaKnown RBP7.27□□□□□ -1.25
VPS26B-204ENST00000527586 PCDHA12Q9UN75 941 aa7.27□□□□□ -1.25
VPS26B-204ENST00000527586 ABCA4P78363 2273 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 SCN8AQ9UQD0 1980 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 ZSCAN5CA6NGD5 496 aaPredicted RBP7.26□□□□□ -1.25
VPS26B-204ENST00000527586 KPNA7A9QM74 516 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 TPP1O14773 563 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 KCNN4O15554 427 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 LRCH4O75427 683 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 GOT1P17174 413 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 SLC8A1P32418 973 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 PMS2P54278 862 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 ZNF630Q2M218 657 aaPredicted RBP7.26□□□□□ -1.25
VPS26B-204ENST00000527586 CRTC2Q53ET0 693 aaPredicted RBP7.26□□□□□ -1.25
VPS26B-204ENST00000527586 PHF19Q5T6S3 580 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 JADE1Q6IE81 842 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 APOA5Q6Q788 366 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 ZNF517Q6ZMY9 492 aaPredicted RBP7.26□□□□□ -1.25
VPS26B-204ENST00000527586 MMAAQ8IVH4 418 aaKnown RBP7.26□□□□□ -1.25
VPS26B-204ENST00000527586 SLC22A18ASQ8N1D0 253 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 CISD2Q8N5K1 135 aaKnown RBP7.26□□□□□ -1.25
VPS26B-204ENST00000527586 AADATQ8N5Z0 425 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 PDZD8Q8NEN9 1154 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 FBXO32Q969P5 355 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 MYLPFQ96A32 169 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 C14orf79Q96F83 325 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 KLF16Q9BXK1 252 aaPredicted RBP7.26□□□□□ -1.25
VPS26B-204ENST00000527586 CXXC4Q9H2H0 198 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 TMEM134Q9H6X4 195 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 MRPL40Q9NQ50 206 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms