RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 YWHAGP61981 247 aaKnown RBP eCLIP16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 GABREP78334 506 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 DLG4P78352 724 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 SLC45A4Q5BKX6 768 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 C1orf220Q5T0J3 134 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 SPOPLQ6IQ16 392 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 SV2AQ7L0J3 742 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 OR4C6Q8NH72 309 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 FAM129BQ96TA1 746 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 C7orf25Q9BPX7 421 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 CUEDC2Q9H467 287 aa16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 APOBEC3GQ9HC16 384 aaKnown RBP16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 INTS6Q9UL03 887 aaKnown RBP16.9■□□□□ 0.3
CHMP4A-203ENST00000527154 LY6G6EA0A0G2JKS1 128 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 A0A1W2PNU3 283 aaPredicted RBP16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 IKBKBO14920 756 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 KLK10O43240 276 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 EXOC3O60645 756 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 IGLV3-27P01718 113 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 ASLP04424 464 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 GP1BAP07359 652 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 GOT1P17174 413 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 TRIM21P19474 475 aaKnown RBP16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 NUDT1P36639 197 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 HARS2P49590 506 aaKnown RBP16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 PPP2CBP62714 309 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 PPP2CAP67775 309 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 KNOP1Q1ED39 458 aaKnown RBP16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 PIK3R6Q5UE93 754 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 NELFCDQ8IXH7 590 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 ZNF557Q8N988 423 aaPredicted RBP16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 DEPDC7Q96QD5 511 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 KDM4CQ9H3R0 1056 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 THSD1Q9NS62 852 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 OLA1Q9NTK5 396 aaKnown RBP16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 U3KQA8 63 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 NBPF19A0A087WUL8 3843 aa16.89■□□□□ 0.29
CHMP4A-203ENST00000527154 AHCTF1Q8WYP5 2266 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 RNASEH1O60930 286 aaKnown RBP16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 RNASEH2AO75792 299 aaKnown RBP16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 POLR2EP19388 210 aaKnown RBP16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 SLC8A1P32418 973 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 DRD3P35462 400 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 SLC39A14Q15043 492 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 RABEP1Q15276 862 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 FAM133BQ5BKY9 247 aaKnown RBP16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 COLEC12Q5KU26 742 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 UNC13DQ70J99 1090 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 PIGZQ86VD9 579 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 FIBINQ8TAL6 211 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 GOLGA5Q8TBA6 731 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 TMC2Q8TDI7 906 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 PRR11Q96HE9 360 aaPredicted RBP16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 VCPIP1Q96JH7 1222 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 SMC3Q9UQE7 1217 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 DMTF1Q9Y222 760 aa16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 TLN1Q9Y490 2541 aaKnown RBP16.88■□□□□ 0.29
CHMP4A-203ENST00000527154 RELNP78509 3460 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 A0A1B0GVM2 712 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 IRAK2O43187 625 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 MAGEC1O60732 1142 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 USP12O75317 370 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 C5AR1P21730 350 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 ARHGAP17Q68EM7 881 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 SND1Q7KZF4 910 aaKnown RBP eCLIP16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 RSRC2Q7L4I2 434 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 MMAAQ8IVH4 418 aaKnown RBP16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 PDILTQ8N807 584 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 EXD3Q8N9H8 876 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 GRAMD1AQ96CP6 724 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 SLC46A1Q96NT5 459 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 OMDQ99983 421 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 CYTH4Q9UIA0 394 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 PCDHGA8Q9Y5G5 932 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 DOPEY2Q9Y3R5 2298 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 TEX15Q9BXT5 2789 aa16.87■□□□□ 0.29
CHMP4A-203ENST00000527154 CDRT15L2A8MXV6 281 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 ZBED1O96006 694 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 ADH1BP00325 375 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 HLA-DRAP01903 254 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 NTRK1P04629 796 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 SRPRAP08240 638 aaKnown RBP16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 DGKAP23743 735 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 CSKP41240 450 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 MCCD1P59942 119 aaPredicted RBP16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 AMPD3Q01432 767 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 ARL13BQ3SXY8 428 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 KIAA1614Q5VZ46 1190 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 XKR5Q6UX68 686 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 TRIM69Q86WT6 500 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 TMEM145Q8NBT3 493 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 GANCQ8TET4 914 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 AZIN2Q96A70 460 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 FAXDC2Q96IV6 333 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 STARD5Q9NSY2 213 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 UNC79Q9P2D8 2635 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 FLNCQ14315 2725 aa16.86■□□□□ 0.29
CHMP4A-203ENST00000527154 EDDM13A0A1B0GTR0 161 aa16.85■□□□□ 0.29
CHMP4A-203ENST00000527154 SLC7A4O43246 635 aa16.85■□□□□ 0.29
CHMP4A-203ENST00000527154 SDC3O75056 442 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms