RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 TRIM10Q9UDY6 481 aa17.18■□□□□ 0.34
SMCO4-204ENST00000527149 PCSK1NQ9UHG2 260 aa17.18■□□□□ 0.34
SMCO4-204ENST00000527149 LCMT1Q9UIC8 334 aa17.18■□□□□ 0.34
SMCO4-204ENST00000527149 USP18Q9UMW8 372 aa17.18■□□□□ 0.34
SMCO4-204ENST00000527149 SLC27A6Q9Y2P4 619 aa17.18■□□□□ 0.34
SMCO4-204ENST00000527149 A0A0A0MRY4 1105 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 A0A1B0GVM2 712 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 ANTXRLA6NF34 631 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 TCAF2A6NFQ2 919 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.17■□□□□ 0.34
SMCO4-204ENST00000527149 PRPSAP2O60256 369 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 CNTN5O94779 1100 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 LRIG2O94898 1065 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 LUC7L3O95232 432 aaKnown RBP17.17■□□□□ 0.34
SMCO4-204ENST00000527149 EGFP01133 1207 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 CHRNB1P11230 501 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 HLA-FP30511 346 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 HOXC13P31276 330 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 L1CAMP32004 1257 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 ARHGAP25P42331 645 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 ALFQ53S48 1182 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 EFHC2Q5JST6 749 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 RABGAP1LQ5R372 815 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 GRAMD4Q6IC98 578 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 CXorf57Q6NSI4 855 aaKnown RBP17.17■□□□□ 0.34
SMCO4-204ENST00000527149 CHST9Q7L1S5 443 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 PSTKQ8IV42 348 aaKnown RBP17.17■□□□□ 0.34
SMCO4-204ENST00000527149 SUGP1Q8IWZ8 645 aaKnown RBP17.17■□□□□ 0.34
SMCO4-204ENST00000527149 CCAR2Q8N163 923 aaKnown RBP17.17■□□□□ 0.34
SMCO4-204ENST00000527149 CLDN23Q96B33 292 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 PPP1R9BQ96SB3 815 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 PNKPQ96T60 521 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 ARHGEF4Q9NR80 690 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 DLGAP2Q9P1A6 1054 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 DEC1Q9P2X7 70 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 OR12D3Q9UGF7 316 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 NDRG2Q9UN36 371 aaKnown RBP17.17■□□□□ 0.34
SMCO4-204ENST00000527149 AP4E1Q9UPM8 1137 aa17.17■□□□□ 0.34
SMCO4-204ENST00000527149 CACNA1IQ9P0X4 2223 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 DLL1O00548 723 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 BUB1BO60566 1050 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-204ENST00000527149 KAT7O95251 611 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 AOC1P19801 751 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 DRD1P21728 446 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 DGKGP49619 791 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 MESDQ14696 234 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 UBXN2BQ14CS0 331 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 FSCBQ5H9T9 825 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 KIAA0907Q7Z7F0 614 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-204ENST00000527149 KIAA1328Q86T90 577 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 FLCNQ8NFG4 579 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 OR52K2Q8NGK3 314 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 TPCN2Q8NHX9 752 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 TEKT4Q8WW24 435 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 KCTD15Q96SI1 283 aaPredicted RBP17.16■□□□□ 0.34
SMCO4-204ENST00000527149 NELL2Q99435 816 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 GOLPH3Q9H4A6 298 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 RBM12Q9NTZ6 932 aaKnown RBP17.16■□□□□ 0.34
SMCO4-204ENST00000527149 STIM2Q9P246 746 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 PPARGC1AQ9UBK2 798 aaKnown RBP17.16■□□□□ 0.34
SMCO4-204ENST00000527149 HCN2Q9UL51 889 aa17.16■□□□□ 0.34
SMCO4-204ENST00000527149 MRPS17Q9Y2R5 130 aaKnown RBP17.16■□□□□ 0.34
SMCO4-204ENST00000527149 TYW5A2RUC4 315 aaKnown RBP17.15■□□□□ 0.34
SMCO4-204ENST00000527149 FAM170BA6NMN3 283 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 TMEM110-MUSTN1A8MSY1 372 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 PRRT4C9JH25 899 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 K7EQS6 105 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 PI15O43692 258 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 GPR37L1O60883 481 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 RARAP10276 462 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 GRIA2P42262 883 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 GRSF1Q12849 480 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMCO4-204ENST00000527149 DPYSL2Q16555 572 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 GEN1Q17RS7 908 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 SMTNL2Q2TAL5 461 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 KCNT1Q5JUK3 1230 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 ERMARDQ5T6L9 678 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 TMEM215Q68D42 235 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 C11orf63Q6NUN7 778 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 NLRP14Q86W24 1093 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 MFN1Q8IWA4 741 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 FBXL6Q8N531 539 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 FIBINQ8TAL6 211 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 MFSD1Q9H3U5 465 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 MPP6Q9NZW5 540 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 MUC6Q6W4X9 2439 aa17.15■□□□□ 0.34
SMCO4-204ENST00000527149 CLDN11O75508 207 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 CD70P32970 193 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 ARSEP51690 589 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 CLCN5P51795 746 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 CDH4P55283 916 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 CCDC173Q0VFZ6 552 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 LMAN2Q12907 356 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 CDH18Q13634 790 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 GAS6Q14393 721 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 BOLA3Q53S33 107 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 LRRC31Q6UY01 552 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 Q6ZS52 159 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 ANKS1BQ7Z6G8 1248 aa17.14■□□□□ 0.33
SMCO4-204ENST00000527149 CARNMT1Q8N4J0 409 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms