RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 RNPEPL1Q9HAU8 725 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 FAM105AQ9NUU6 356 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 FBXW11Q9UKB1 542 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 CDY2AQ9Y6F7 541 aa18.05■□□□□ 0.48
USH1C-205ENST00000527020 TPP1O14773 563 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 CCDC22O60826 627 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 DIAPH2O60879 1101 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 USP17L7P0C7H9 530 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 GNAT1P11488 350 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 AIF1P55008 147 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 MRPS6P82932 125 aaKnown RBP18.04■□□□□ 0.48
USH1C-205ENST00000527020 SMAD1Q15797 465 aaKnown RBP18.04■□□□□ 0.48
USH1C-205ENST00000527020 WASHC2DQ5SRD0 308 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 STXBP5Q5T5C0 1151 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 RFWD3Q6PCD5 774 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 CES3Q6UWW8 571 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 RINLQ6ZS11 566 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 ZCCHC23Q6ZST2 131 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 PID1Q7Z2X4 250 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 ACMSDQ8TDX5 336 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 TUBB6Q9BUF5 446 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 CNGB3Q9NQW8 809 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 ARMCX1Q9P291 453 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 ST3GAL5Q9UNP4 418 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 CAPN9O14815 690 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 PRKCGP05129 697 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 LHX1P48742 406 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 IFRD2Q12894 506 aaPredicted RBP18.04■□□□□ 0.48
USH1C-205ENST00000527020 TAF2Q6P1X5 1199 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 KYAT3Q6YP21 454 aaKnown RBP18.04■□□□□ 0.48
USH1C-205ENST00000527020 TMEM86AQ8N2M4 240 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 OR52K1Q8NGK4 314 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 TTC8Q8TAM2 541 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 CDKL2Q92772 493 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 PGAP3Q96FM1 320 aaPredicted RBP18.04■□□□□ 0.48
USH1C-205ENST00000527020 FCRL3Q96P31 734 aaPredicted RBP18.04■□□□□ 0.48
USH1C-205ENST00000527020 PAAF1Q9BRP4 392 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 NAT9Q9BTE0 207 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 SLC38A7Q9NVC3 462 aa18.04■□□□□ 0.48
USH1C-205ENST00000527020 HBS1LQ9Y450 684 aaKnown RBP18.04■□□□□ 0.48
USH1C-205ENST00000527020 GSC2O15499 205 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 ITGA2BP08514 1039 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 RPSAP08865 295 aaKnown RBP18.03■□□□□ 0.48
USH1C-205ENST00000527020 ERVK-10P10266 1014 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 GNAZP19086 355 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 CALB2P22676 271 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 CCNG1P51959 295 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 IRX4P78413 519 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 CDK18Q07002 472 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 PPIDQ08752 370 aaKnown RBP18.03■□□□□ 0.48
USH1C-205ENST00000527020 NAB1Q13506 487 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 FERMT1Q9BQL6 677 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 RHOBTB2Q9BYZ6 727 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 MARCOQ9UEW3 520 aaPredicted RBP18.03■□□□□ 0.48
USH1C-205ENST00000527020 RPL26L1Q9UNX3 145 aaKnown RBP18.03■□□□□ 0.48
USH1C-205ENST00000527020 SNX10Q9Y5X0 201 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 CAPN14A8MX76 684 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 ENTPD5O75356 428 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 LTFP02788 710 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 THP07101 528 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 KITP10721 976 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 NCAM1P13591 858 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 HCAR3P49019 387 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 TPI1P60174 286 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 FASTKD1Q53R41 847 aaKnown RBP18.03■□□□□ 0.48
USH1C-205ENST00000527020 N4BP2L1Q5TBK1 243 aaPredicted RBP18.03■□□□□ 0.48
USH1C-205ENST00000527020 MBLAC2Q68D91 279 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 TREML1Q86YW5 311 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 RTP3Q9BQQ7 232 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 DDIT4Q9NX09 232 aa18.03■□□□□ 0.48
USH1C-205ENST00000527020 KLHL8Q9P2G9 620 aaPredicted RBP18.03■□□□□ 0.48
USH1C-205ENST00000527020 PTPRDP23468 1912 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 ARL5CA6NH57 179 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 PLIN3O60664 434 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 USP12O75317 370 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 TPBGLP0DKB5 382 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 FGF3P11487 239 aaPredicted RBP18.02■□□□□ 0.48
USH1C-205ENST00000527020 CD68P34810 354 aaPredicted RBP18.02■□□□□ 0.48
USH1C-205ENST00000527020 STX3Q13277 289 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 KCTD11Q693B1 232 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 C4orf50Q6ZRC1 276 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 RPAINQ86UA6 219 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 RASSF3Q86WH2 238 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 CRLF3Q8IUI8 442 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 ENDOVQ8N8Q3 282 aaKnown RBP18.02■□□□□ 0.48
USH1C-205ENST00000527020 ZNF778Q96MU6 729 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 ZNF570Q96NI8 536 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 AGAP3Q96P47 875 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 COLEC11Q9BWP8 271 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 YY1AP1Q9H869 796 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 TAS2R1Q9NYW7 299 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 TRPV2Q9Y5S1 764 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 RAD54BQ9Y620 910 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 RPS6KL1Q9Y6S9 549 aa18.02■□□□□ 0.48
USH1C-205ENST00000527020 ZBTB24O43167 697 aaPredicted RBP18.01■□□□□ 0.47
USH1C-205ENST00000527020 ITM2AO43736 263 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 GLRA3O75311 464 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 AP2A1O95782 977 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 CHRNA1P02708 482 aa18.01■□□□□ 0.47
USH1C-205ENST00000527020 POLBP06746 335 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms