RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 THEGLP0DJG4 465 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 PABPC1P11940 636 aaKnown RBP14.09□□□□□ -0.15
SSRP1-203ENST00000526696 RIPPLY3P57055 190 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 MYL6P60660 151 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 ACOT1Q86TX2 421 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 ARL14Q8N4G2 192 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 ZNF276Q8N554 614 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 OR14C36Q8NHC7 312 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 HPS3Q969F9 1004 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 JAKMIP2Q96AA8 810 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 ARRDC3Q96B67 414 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 OMDQ99983 421 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 DCLK3Q9C098 648 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 NAGPAQ9UK23 515 aa14.09□□□□□ -0.15
SSRP1-203ENST00000526696 PIAS2O75928 621 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 ITGA2BP08514 1039 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 SLC5A2P31639 672 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 SLC8A1P32418 973 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 CD70P32970 193 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 SGSHP51688 502 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 COG7P83436 770 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 EFEMP1Q12805 493 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 C9orf64Q5T6V5 341 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 CLEC20AQ6ZU45 233 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 C12orf29Q8N999 325 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 WDR36Q8NI36 951 aaKnown RBP14.08□□□□□ -0.16
SSRP1-203ENST00000526696 ZNF516Q92618 1163 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 CALML4Q96GE6 196 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 MRGPRX3Q96LB0 322 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 FAM129BQ96TA1 746 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 HMGXB4Q9UGU5 601 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 PCDHGA4Q9Y5G9 962 aa14.08□□□□□ -0.16
SSRP1-203ENST00000526696 ZNF233A6NK53 670 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 SLC26A4O43511 780 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 GCNT3O95395 438 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 STAU1O95793 577 aaKnown RBP14.07□□□□□ -0.16
SSRP1-203ENST00000526696 GOT1P17174 413 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 MAT2AP31153 395 aaKnown RBP14.07□□□□□ -0.16
SSRP1-203ENST00000526696 CASRP41180 1078 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 MLLT3P42568 568 aaPredicted RBP14.07□□□□□ -0.16
SSRP1-203ENST00000526696 KIF11P52732 1056 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 METAP1P53582 386 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 OVGP1Q12889 678 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 HNRNPA1L2Q32P51 320 aaKnown RBP14.07□□□□□ -0.16
SSRP1-203ENST00000526696 POM121L1PQ3SYA9 428 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 MPPE1Q53F39 396 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 HS1BP3Q53T59 392 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 GUSBP11Q6P575 273 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 CRTC1Q6UUV9 634 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 AHI1Q8N157 1196 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 LARP4BQ92615 738 aaKnown RBP14.07□□□□□ -0.16
SSRP1-203ENST00000526696 GRAMD1AQ96CP6 724 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 DNAJC19Q96DA6 116 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 LMLNQ96KR4 655 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 FAM49BQ9NUQ9 324 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 NLGN3Q9NZ94 848 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 PLAAQ9Y263 795 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 KIF3AQ9Y496 699 aa14.07□□□□□ -0.16
SSRP1-203ENST00000526696 TBC1D3DA0A087WVF3 549 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 TBC1D3IA0A087WXS9 549 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 TBC1D3EA0A087X179 549 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 TBC1D3KA0A087X1G2 549 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 TBC1D3FA6NER0 549 aaPredicted RBP14.06□□□□□ -0.16
SSRP1-203ENST00000526696 TBC1D3LB9A6J9 549 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 K7ESM1 405 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 MAGEC1O60732 1142 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 NEBLO76041 1014 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 TBC1D3HP0C7X1 549 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 DLATP10515 647 aaKnown RBP14.06□□□□□ -0.16
SSRP1-203ENST00000526696 DRD3P35462 400 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 PSMD8P48556 350 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 HARS2P49590 506 aaKnown RBP14.06□□□□□ -0.16
SSRP1-203ENST00000526696 SFSWAPQ12872 951 aaKnown RBP14.06□□□□□ -0.16
SSRP1-203ENST00000526696 SURF1Q15526 300 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 TBC1D3GQ6DHY5 549 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 TBC1D3CQ6IPX1 549 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 SCARA5Q6ZMJ2 495 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 RBM44Q6ZP01 1051 aaKnown RBP14.06□□□□□ -0.16
SSRP1-203ENST00000526696 SND1Q7KZF4 910 aaKnown RBP eCLIP14.06□□□□□ -0.16
SSRP1-203ENST00000526696 CCDC186Q7Z3E2 898 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 VASH2Q86V25 355 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 TBC1D3Q8IZP1 549 aaPredicted RBP14.06□□□□□ -0.16
SSRP1-203ENST00000526696 SYCP3Q8IZU3 236 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 TNIP3Q96KP6 325 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 KLHL11Q9NVR0 708 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 CLIC5Q9NZA1 410 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 CYTH4Q9UIA0 394 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 PCDHA5Q9Y5H7 936 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 UNC13CQ8NB66 2214 aa14.06□□□□□ -0.16
SSRP1-203ENST00000526696 HIVEP3Q5T1R4 2406 aa14.05□□□□□ -0.16
SSRP1-203ENST00000526696 RNASEH1O60930 286 aaKnown RBP14.05□□□□□ -0.16
SSRP1-203ENST00000526696 ATP5BP06576 529 aaKnown RBP14.05□□□□□ -0.16
SSRP1-203ENST00000526696 RALAP11233 206 aa14.05□□□□□ -0.16
SSRP1-203ENST00000526696 POLR2EP19388 210 aaKnown RBP14.05□□□□□ -0.16
SSRP1-203ENST00000526696 ADORA2BP29275 332 aa14.05□□□□□ -0.16
SSRP1-203ENST00000526696 UBA7P41226 1012 aa14.05□□□□□ -0.16
SSRP1-203ENST00000526696 KCNMA1Q12791 1236 aa14.05□□□□□ -0.16
SSRP1-203ENST00000526696 STAT4Q14765 748 aa14.05□□□□□ -0.16
SSRP1-203ENST00000526696 DRAP1Q14919 205 aaPredicted RBP14.05□□□□□ -0.16
SSRP1-203ENST00000526696 NCAPHQ15003 741 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms