RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 LRRC31Q6UY01 552 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 POLNQ7Z5Q5 900 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 TFAP2DQ7Z6R9 452 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 C12orf40Q86WS4 652 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 GJD3Q8N144 294 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 CARNMT1Q8N4J0 409 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 KCTD6Q8NC69 237 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 WFDC5Q8TCV5 224 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 TMA16Q96EY4 203 aaKnown RBP14.15□□□□□ -0.14
CD44-224ENST00000526669 CALN1Q9BXU9 219 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 HEBP1Q9NRV9 189 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 DDX56Q9NY93 547 aaKnown RBP14.15□□□□□ -0.14
CD44-224ENST00000526669 CWC15Q9P013 229 aaKnown RBP14.15□□□□□ -0.14
CD44-224ENST00000526669 CLEC4EQ9ULY5 219 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 NEU3Q9UQ49 428 aa14.15□□□□□ -0.14
CD44-224ENST00000526669 TYW5A2RUC4 315 aaKnown RBP14.14□□□□□ -0.15
CD44-224ENST00000526669 H3BRJ5 948 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 ADH1CP00326 375 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 TYRP14679 529 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 AMPD1P23109 780 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 HOXD9P28356 352 aaPredicted RBP14.14□□□□□ -0.15
CD44-224ENST00000526669 ARL4AP40617 200 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 ARSEP51690 589 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 GNG11P61952 73 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 GAD2Q05329 585 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 MTA1Q13330 715 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 ZNF211Q13398 564 aaPredicted RBP14.14□□□□□ -0.15
CD44-224ENST00000526669 GAB4Q2WGN9 574 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 ITPRIPL2Q3MIP1 535 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 LRRC38Q5VT99 294 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 AADACL2Q6P093 401 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 MFSD7Q6UXD7 560 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 ANKS1BQ7Z6G8 1248 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 PSTKQ8IV42 348 aaKnown RBP14.14□□□□□ -0.15
CD44-224ENST00000526669 CCDC50Q8IVM0 306 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 KIAA1958Q8N8K9 716 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 NETO2Q8NC67 525 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 ALG3Q92685 438 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 C1orf74Q96LT6 269 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 PSMB7Q99436 277 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 KCND1Q9NSA2 647 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 MUTYHQ9UIF7 546 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 DUSP12Q9UNI6 340 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 SORCS3Q9UPU3 1222 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 MFHAS1Q9Y4C4 1052 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 PCDHA3Q9Y5H8 950 aa14.14□□□□□ -0.15
CD44-224ENST00000526669 TECTAO75443 2155 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 IGLV3-10A0A075B6K4 115 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 CCDC66A2RUB6 948 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 TRIM24O15164 1050 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 DAPK3O43293 454 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 SRFP11831 508 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 EPHB2P29323 1055 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 GJA4P35212 333 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 SLC6A11P48066 632 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 PEX5P50542 639 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 NRG1Q02297 640 aaPredicted RBP14.13□□□□□ -0.15
CD44-224ENST00000526669 KDSRQ06136 332 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 NR1H3Q13133 447 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 RPS6KA1Q15418 735 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 KATNAL2Q8IYT4 538 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 UBL4BQ8N7F7 174 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 HES6Q96HZ4 224 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 CSPG4P5Q96PW8 444 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 WDR24Q96S15 920 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 ZYG11BQ9C0D3 744 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 NDFIP2Q9NV92 336 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 ETNK2Q9NVF9 386 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 MARK1Q9P0L2 795 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 CA14Q9ULX7 337 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.13□□□□□ -0.15
CD44-224ENST00000526669 TTC28Q96AY4 2481 aa14.13□□□□□ -0.15
CD44-224ENST00000526669 A0A1B0GVM2 712 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 TCAF2A6NFQ2 919 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 C3orf70A6NLC5 250 aaPredicted RBP14.12□□□□□ -0.15
CD44-224ENST00000526669 DRGXA6NNA5 263 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 MIF4GDA9UHW6 222 aaKnown RBP14.12□□□□□ -0.15
CD44-224ENST00000526669 H0Y626 953 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 HOXC11O43248 304 aaPredicted RBP14.12□□□□□ -0.15
CD44-224ENST00000526669 LUC7L3O95232 432 aaKnown RBP14.12□□□□□ -0.15
CD44-224ENST00000526669 PENKP01210 267 aaPredicted RBP14.12□□□□□ -0.15
CD44-224ENST00000526669 ATP1A1P05023 1023 aaKnown RBP14.12□□□□□ -0.15
CD44-224ENST00000526669 HOXC13P31276 330 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 RWDD2BP57060 319 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 DPYSQ14117 519 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 PDK2Q15119 407 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 C5orf22Q49AR2 442 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 DCAF12L1Q5VU92 463 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 KAZNQ674X7 775 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 ASTLQ6HA08 431 aaPredicted RBP14.12□□□□□ -0.15
CD44-224ENST00000526669 SPOCD1Q6ZMY3 1216 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 RFX8Q6ZV50 586 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 RFX6Q8HWS3 928 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 MFN1Q8IWA4 741 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 FAM71BQ8TC56 605 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 TSC1Q92574 1164 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 DNASE1L2Q92874 299 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 CHFRQ96EP1 664 aa14.12□□□□□ -0.15
CD44-224ENST00000526669 C16orf45Q96MC5 204 aaPredicted RBP14.12□□□□□ -0.15
CD44-224ENST00000526669 UHRF1Q96T88 793 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms