RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 DYRK1AQ13627 763 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 MINDY4Q4G0A6 757 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 HECTD2Q5U5R9 776 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 NXNQ6DKJ4 435 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 SNRNP48Q6IEG0 339 aaKnown RBP4.99□□□□□ -1.61
USP48-211ENST00000526044 C17orf99Q6UX52 265 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 TCEAL8Q8IYN2 117 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 BLIDQ8IZY5 108 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 SAMD3Q8N6K7 520 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 ANKRD13CQ8N6S4 541 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 BEND2Q8NDZ0 799 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 CCDC148Q8NFR7 591 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 BICD2Q8TD16 824 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 LINC00476Q8WZB0 136 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 CUL5Q93034 780 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 Q96MF0 132 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 TRIB1Q96RU8 372 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 VKORC1Q9BQB6 163 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 CNPPD1Q9BV87 410 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 MOV10L1Q9BXT6 1211 aaKnown RBP4.99□□□□□ -1.61
USP48-211ENST00000526044 TEX13BQ9BXU2 312 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 SPATC1LQ9H0A9 340 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 ZMYND12Q9H0C1 365 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 GLT8D2Q9H1C3 349 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 MROH8Q9H579 483 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 TXNRD2Q9NNW7 524 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 SARS2Q9NP81 518 aaKnown RBP4.99□□□□□ -1.61
USP48-211ENST00000526044 CASS4Q9NQ75 786 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.99□□□□□ -1.61
USP48-211ENST00000526044 GJB4Q9NTQ9 266 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 RNF186Q9NXI6 227 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 MAP3K20Q9NYL2 800 aaKnown RBP4.99□□□□□ -1.61
USP48-211ENST00000526044 VPS54Q9P1Q0 977 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 MORF4L1Q9UBU8 362 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 FBXO40Q9UH90 709 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 CPA4Q9UI42 421 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 KCNJ14Q9UNX9 436 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 DMTF1Q9Y222 760 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 RIPK3Q9Y572 518 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 DMRT1Q9Y5R6 373 aa4.99□□□□□ -1.61
USP48-211ENST00000526044 EPN1Q9Y6I3 576 aaPredicted RBP4.99□□□□□ -1.61
USP48-211ENST00000526044 ESYT2A0FGR8 921 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 VPS37CA5D8V6 355 aaPredicted RBP4.98□□□□□ -1.61
USP48-211ENST00000526044 BTBD18B2RXH4 712 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 GCOM1H8Y6P7 765 aaPredicted RBP4.98□□□□□ -1.61
USP48-211ENST00000526044 TOR1BO14657 336 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 TSPAN6O43657 245 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 STRNO43815 780 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 AHSGP02765 367 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 MMP1P03956 469 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 POLR2MP0CAP2 368 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 PTMSP20962 102 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 HTR1BP28222 390 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 KRT2P35908 639 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 SEC24CP53992 1094 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 FGL2Q14314 439 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 KCTD2Q14681 263 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 CD300EQ496F6 205 aaPredicted RBP4.98□□□□□ -1.61
USP48-211ENST00000526044 KHDC1LQ5JSQ8 128 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 EMC10Q5UCC4 262 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 WDR78Q5VTH9 848 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 TAPT1Q6NXT6 567 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 DAAM2Q86T65 1068 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 USP37Q86T82 979 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 DNAJC5GQ8N7S2 189 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 POC1BQ8TC44 478 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 TBC1D5Q92609 795 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 TMEM125Q96AQ2 219 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 LRIG1Q96JA1 1093 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 ZSCAN16Q9H4T2 348 aaPredicted RBP4.98□□□□□ -1.61
USP48-211ENST00000526044 ACAD9Q9H845 621 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 RSAD1Q9HA92 442 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 RIC8AQ9NPQ8 531 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 RNF146Q9NTX7 359 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 INTS13Q9NVM9 706 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 CHMP5Q9NZZ3 219 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 PCDHA6Q9UN73 950 aa4.98□□□□□ -1.61
USP48-211ENST00000526044 CCDC189A1A4V9 331 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 HMGB1P1B2RPK0 211 aaPredicted RBP4.97□□□□□ -1.61
USP48-211ENST00000526044 MEIS2O14770 477 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 ESRRBO95718 433 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 HDCP19113 662 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 GATA3P23771 443 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 U2AF2P26368 475 aaKnown RBP eCLIP4.97□□□□□ -1.611e-7■□□□□ 11.3
USP48-211ENST00000526044 MAPK4P31152 587 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 HOXA13P31271 388 aaPredicted RBP4.97□□□□□ -1.61
USP48-211ENST00000526044 NANOS3P60323 173 aaKnown RBP4.97□□□□□ -1.61
USP48-211ENST00000526044 SP3Q02447 781 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 MPP3Q13368 585 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 BAATQ14032 418 aaPredicted RBP4.97□□□□□ -1.61
USP48-211ENST00000526044 HLXQ14774 488 aaPredicted RBP4.97□□□□□ -1.61
USP48-211ENST00000526044 ARHGEF6Q15052 776 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 FAM110CQ1W6H9 321 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 PREPLQ4J6C6 727 aaPredicted RBP4.97□□□□□ -1.61
USP48-211ENST00000526044 JAKMIP3Q5VZ66 844 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 USP17L6PQ6QN14 398 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 PCSK4Q6UW60 755 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 SLC30A10Q6XR72 485 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 MICALCLQ6ZW33 695 aa4.97□□□□□ -1.61
USP48-211ENST00000526044 TMPRSS9Q7Z410 1059 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms