RNA–Protein interactions for RNA: ENST00000525293.5

CD44-216, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-216ENST00000525293 ALDH7A1P49419 539 aaKnown RBP2.68□□□□□ -1.98
CD44-216ENST00000525293 THBS3P49746 956 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 HTR6P50406 440 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 CBFBQ13951 182 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 UBE4AQ14139 1066 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 SIM2Q14190 667 aaPredicted RBP2.68□□□□□ -1.98
CD44-216ENST00000525293 KCTD2Q14681 263 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 SLC35G1Q2M3R5 365 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 SMTNL2Q2TAL5 461 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 ALDH1L2Q3SY69 923 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 SYCP2LQ5T4T6 812 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 ARMC3Q5W041 872 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 CCDC70Q6NSX1 233 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 MSANTD2Q6P1R3 559 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 KSR2Q6VAB6 950 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 RFX8Q6ZV50 586 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 DPP9Q86TI2 863 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 PELI3Q8N2H9 469 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 TMEM199Q8N511 208 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 ACRBPQ8NEB7 543 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 PJA1Q8NG27 643 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 SVIPQ8NHG7 77 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 PARD3BQ8TEW8 1205 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 BRI3BPQ8WY22 251 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 MSI2Q96DH6 328 aaKnown RBP2.68□□□□□ -1.98
CD44-216ENST00000525293 MARK4Q96L34 752 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 RIPOR3Q96MK2 946 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 MPHOSPH6Q99547 160 aaKnown RBP2.68□□□□□ -1.98
CD44-216ENST00000525293 PIMREGQ9BSJ6 248 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 ABHD14AQ9BUJ0 271 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 ALDH8A1Q9H2A2 487 aaPredicted RBP2.68□□□□□ -1.98
CD44-216ENST00000525293 EPS8L2Q9H6S3 715 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 AAMDCQ9H7C9 122 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 FSCN3Q9NQT6 498 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 FBXO28Q9NVF7 368 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 ANAPC4Q9UJX5 808 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 UTS2RQ9UKP6 389 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 AGO2Q9UKV8 859 aaKnown RBP2.68□□□□□ -1.98
CD44-216ENST00000525293 PCDHA12Q9UN75 941 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 CEP83Q9Y592 693 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 PCDHB7Q9Y5E2 793 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 SCINQ9Y6U3 715 aa2.68□□□□□ -1.98
CD44-216ENST00000525293 A0A0G2JK05 382 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 KIR2DS5A0A0G2JLQ3 304 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 DPPA5A6NC42 116 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 ERICH4A6NGS2 130 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 KIR2DS3K7RE56 304 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 KAT7O95251 611 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 ITGA5P08648 1049 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 EEF1GP26641 437 aaKnown RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 CDKN2AP42771 156 aaKnown RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 SLC37A1P57057 533 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 NANOS2P60321 138 aaKnown RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 PPATQ06203 517 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 CSHL1Q14406 222 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 SEMA3AQ14563 771 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 PGM5Q15124 567 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 E2F5Q15329 346 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 DLGAP5Q15398 846 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 INPP5JQ15735 1006 aaPredicted RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 KLHL22Q53GT1 634 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 PIK3CD-AS1Q5SR53 167 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 MFSD4BQ5TF39 518 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 NUGGCQ68CJ6 796 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 LVRNQ6Q4G3 990 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 ZNF474Q6S9Z5 364 aaPredicted RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 CRELD2Q6UXH1 353 aaPredicted RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 B4GALNT4Q76KP1 1039 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 ZSCAN30Q86W11 494 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 HSCBQ8IWL3 235 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 SUGP1Q8IWZ8 645 aaKnown RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 FAM47BQ8NA70 645 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 SRFBP1Q8NEF9 429 aaKnown RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 SLC22A17Q8WUG5 538 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 SNRNP27Q8WVK2 155 aaKnown RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 ASB5Q8WWX0 329 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 WASF1Q92558 559 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 NPIPB3Q92617 1050 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 EME1Q96AY2 570 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 MCRS1Q96EZ8 462 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 LYZL4Q96KX0 146 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 CENPOQ9BU64 300 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 HIPK2Q9H2X6 1198 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 HELLSQ9NRZ9 838 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 THSD1Q9NS62 852 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 CWC25Q9NXE8 425 aaPredicted RBP2.67□□□□□ -1.98
CD44-216ENST00000525293 DTNAQ9Y4J8 743 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 SYNRGQ9UMZ2 1314 aa2.67□□□□□ -1.98
CD44-216ENST00000525293 FAM90A8PA6NJQ4 464 aa2.66□□□□□ -1.98
CD44-216ENST00000525293 M0QYT0 321 aa2.66□□□□□ -1.98
CD44-216ENST00000525293 ATG13O75143 517 aa2.66□□□□□ -1.98
CD44-216ENST00000525293 PPP6R2O75170 966 aa2.66□□□□□ -1.98
CD44-216ENST00000525293 SGPL1O95470 568 aa2.66□□□□□ -1.98
CD44-216ENST00000525293 NTSR2O95665 410 aa2.66□□□□□ -1.98
CD44-216ENST00000525293 CER1O95813 267 aa2.66□□□□□ -1.98
CD44-216ENST00000525293 FAM90A13PP0C7W8 464 aa2.66□□□□□ -1.98
CD44-216ENST00000525293 FAM90A24PP0C7X0 464 aa2.66□□□□□ -1.98
CD44-216ENST00000525293 CHRNB1P11230 501 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms