RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 FSCBQ5H9T9 825 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 FKBP15Q5T1M5 1219 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 SYCP2LQ5T4T6 812 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 DAB2IPQ5VWQ8 1189 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 MMS22LQ6ZRQ5 1243 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 SLC26A9Q7LBE3 791 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 GPR174Q9BXC1 333 aa19.2■□□□□ 0.66
CAPN1-203ENST00000525013 USP36Q9P275 1121 aaKnown RBP19.2■□□□□ 0.66
CAPN1-203ENST00000525013 KNL1Q8NG31 2342 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 F8VZ95 297 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 DAB1O75553 588 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 MOCS3O95396 460 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 OXTRP30559 389 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 MAPK8P45983 427 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 ST8SIA6P61647 398 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 STX1AQ16623 288 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 UAP1L1Q3KQV9 507 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 SLC23A3Q6PIS1 610 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 RABEPKQ7Z6M1 372 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 FAM124AQ86V42 546 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 ERICH1Q86X53 443 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 ZDHHC17Q8IUH5 632 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 ANKRD20A12PQ8NF67 263 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 CEP76Q8TAP6 659 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 FOXJ1Q92949 421 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 ZNF419Q96HQ0 510 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-203ENST00000525013 LMLNQ96KR4 655 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 FAM207AQ9NSI2 230 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-203ENST00000525013 WSB2Q9NYS7 404 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-203ENST00000525013 KIAA1522Q9P206 1035 aaPredicted RBP19.19■□□□□ 0.66
CAPN1-203ENST00000525013 SUN2Q9UH99 717 aa19.19■□□□□ 0.66
CAPN1-203ENST00000525013 MEI4A8MW99 385 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 M0QYT0 321 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 MBD3O95983 291 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 ASLP04424 464 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 ENGP17813 658 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 NOS2P35228 1153 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 KLK7P49862 253 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 GFPT1Q06210 699 aaPredicted RBP19.18■□□□□ 0.66
CAPN1-203ENST00000525013 EIF4EBP2Q13542 120 aaPredicted RBP19.18■□□□□ 0.66
CAPN1-203ENST00000525013 PITRM1Q5JRX3 1037 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 WDR45BQ5MNZ6 344 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 NOP9Q86U38 636 aaKnown RBP19.18■□□□□ 0.66
CAPN1-203ENST00000525013 TTC17Q96AE7 1141 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 C18orf8Q96DM3 657 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 NUP58Q9BVL2 599 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 PRSS16Q9NQE7 514 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 FSCN3Q9NQT6 498 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 INTS6Q9UL03 887 aaKnown RBP19.18■□□□□ 0.66
CAPN1-203ENST00000525013 SLC6A14Q9UN76 642 aa19.18■□□□□ 0.66
CAPN1-203ENST00000525013 CDX4O14627 284 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 GFPT2O94808 682 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 SERPINF2P08697 491 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 CDK11BP21127 795 aaKnown RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 MAOBP27338 520 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 CDH5P33151 784 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 MATKP42679 507 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 ATXN3P54252 364 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 POLR2FP61218 127 aaKnown RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 MYL5Q02045 173 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 RABGAP1LQ5R372 815 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 CCDC183Q5T5S1 534 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 FAM102AQ5T9C2 384 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 PEAR1Q5VY43 1037 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 CIR1Q86X95 450 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 MSANTD4Q8NCY6 345 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 ZNF397Q8NF99 534 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 PCMTD1Q96MG8 357 aaPredicted RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 PRMT1Q99873 361 aaKnown RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 GTPBP2Q9BX10 602 aaKnown RBP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 GANQ9H2C0 597 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 MTG2Q9H4K7 406 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 FBRSQ9HAH7 460 aa19.17■□□□□ 0.66
CAPN1-203ENST00000525013 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.17■□□□□ 0.66
CAPN1-203ENST00000525013 PCNX2A6NKB5 2137 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 GOLGA8SH3BPF8 625 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 LSM8O95777 96 aaKnown RBP19.16■□□□□ 0.66
CAPN1-203ENST00000525013 MMEP08473 750 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 ADRB1P08588 477 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 GNSP15586 552 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 CTSOP43234 321 aaPredicted RBP19.16■□□□□ 0.66
CAPN1-203ENST00000525013 NUMBP49757 651 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 COPB1P53618 953 aaKnown RBP19.16■□□□□ 0.66
CAPN1-203ENST00000525013 C2CD6Q53TS8 623 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 NAA35Q5VZE5 725 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 RNF219Q5W0B1 726 aaPredicted RBP19.16■□□□□ 0.66
CAPN1-203ENST00000525013 FBXL22Q6P050 247 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 CCAR2Q8N163 923 aaKnown RBP19.16■□□□□ 0.66
CAPN1-203ENST00000525013 CPA5Q8WXQ8 436 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 RPRD1AQ96P16 312 aaPredicted RBP19.16■□□□□ 0.66
CAPN1-203ENST00000525013 SIK2Q9H0K1 926 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 NLRC4Q9NPP4 1024 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 RRN3Q9NYV6 651 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 VANGL2Q9ULK5 521 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 STAP1Q9ULZ2 295 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 ERVW-1Q9UQF0 538 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 ACACBO00763 2458 aa19.16■□□□□ 0.66
CAPN1-203ENST00000525013 CHD8Q9HCK8 2581 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 PAGE1O75459 146 aa19.15■□□□□ 0.66
CAPN1-203ENST00000525013 KCNK5O95279 499 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms