RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 PJA1Q8NG27 643 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 OR7D4Q8NG98 312 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 RPLP0P6Q8NHW5 317 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 LRRN4Q8WUT4 740 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 PGAP3Q96FM1 320 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 RPL10LQ96L21 214 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 KCTD15Q96SI1 283 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 PNKPQ96T60 521 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 EIF3CQ99613 913 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 LRFN3Q9BTN0 628 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 SLC6A17Q9H1V8 727 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 KCNF1Q9H3M0 494 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 C8orf33Q9H7E9 229 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 MRPL47Q9HD33 250 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 LZTFL1Q9NQ48 299 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 CACNA2D2Q9NY47 1150 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 RRN3Q9NYV6 651 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 OR12D3Q9UGF7 316 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 SLC12A6Q9UHW9 1150 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 DNAI1Q9UI46 699 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 STOML2Q9UJZ1 356 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 INTS6Q9UL03 887 aaKnown RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 HCN2Q9UL51 889 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 USP18Q9UMW8 372 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 PACSIN2Q9UNF0 486 aaPredicted RBP4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 AP4E1Q9UPM8 1137 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 INVSQ9Y283 1065 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF510Q9Y2H8 683 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 RAD54BQ9Y620 910 aa4.75□□□□□ -1.65
CHMP4A-202ENST00000524955 VCANP13611 3396 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 BRWD1Q9NSI6 2320 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 A0A0D9SEW6 157 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 K7ERQ8 282 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 MYO1FO00160 1098 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 EEF2KO00418 725 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 MAN2B1O00754 1011 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 BNIP3LO60238 219 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 CACNG3O60359 315 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SNAP91O60641 907 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 LRIG2O94898 1065 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 PROSCO94903 275 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 LUC7L3O95232 432 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 IPO7O95373 1038 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 LCA5LO95447 670 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 KLF8O95600 359 aaPredicted RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 FTCDO95954 541 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 KRT1P04264 644 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 RHOCP08134 193 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SLC2A3P11169 496 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 PABPC1P11940 636 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 HLA-EP13747 358 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 HNRNPLP14866 589 aaKnown RBP eCLIP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 VAV1P15498 845 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 AOC1P19801 751 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 COL9A1P20849 921 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 COMTP21964 271 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 AMPD1P23109 780 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 EPHB2P29323 1055 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 AVPR2P30518 371 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 L1CAMP32004 1257 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ACVRL1P37023 503 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 MARCKSL1P49006 195 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 STK19P49842 368 aaPredicted RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 VAV2P52735 878 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 GSDMDP57764 484 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SATB1Q01826 763 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SLC25A11Q02978 314 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 DMWDQ09019 674 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 GRSF1Q12849 480 aaKnown RBP eCLIP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 MTAPQ13126 283 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SRSF5Q13243 272 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 NNTQ13423 1086 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 KCTD19Q17RG1 926 aaPredicted RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ARL13BQ3SXY8 428 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 PITRM1Q5JRX3 1037 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 EFHC2Q5JST6 749 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 RABGAP1LQ5R372 815 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ERMARDQ5T6L9 678 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SMYD5Q6GMV2 418 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 CXorf57Q6NSI4 855 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 PPP1R2P3Q6NXS1 205 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 AADACL2Q6P093 401 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 LRRC31Q6UY01 552 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ARCQ7LC44 396 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ANKS1BQ7Z6G8 1248 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ADIPOR2Q86V24 386 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ZNF354CQ86Y25 554 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SUGP1Q8IWZ8 645 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 FAM217AQ8IXS0 508 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 FBXL6Q8N531 539 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 TERB1Q8NA31 727 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 IL17RCQ8NAC3 791 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 TXNDC5Q8NBS9 432 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 HJURPQ8NCD3 748 aaPredicted RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 RFFLQ8WZ73 363 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 ANP32BQ92688 251 aaKnown RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 RNF25Q96BH1 459 aaPredicted RBP4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 OTUB2Q96DC9 234 aa4.74□□□□□ -1.65
CHMP4A-202ENST00000524955 SHDQ96IW2 340 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms