RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 CAMK4Q16566 473 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 HNRNPA1L2Q32P51 320 aaKnown RBP17.4■□□□□ 0.38
SPIDR-221ENST00000523814 ZC3H12AQ5D1E8 599 aaKnown RBP17.4■□□□□ 0.38
SPIDR-221ENST00000523814 FSCBQ5H9T9 825 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 GJB7Q6PEY0 223 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 CCDC117Q8IWD4 279 aaPredicted RBP17.4■□□□□ 0.38
SPIDR-221ENST00000523814 CFAP52Q8N1V2 620 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 CARNMT1Q8N4J0 409 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 WDTC1Q8N5D0 677 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 BTN2A3PQ96KV6 586 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 MRGPRX3Q96LB0 322 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 BTBD1Q9H0C5 482 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 MTG2Q9H4K7 406 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 SGK2Q9HBY8 427 aa17.4■□□□□ 0.38
SPIDR-221ENST00000523814 XPO7Q9UIA9 1087 aaKnown RBP17.4■□□□□ 0.38
SPIDR-221ENST00000523814 MUC22E2RYF6 1773 aaPredicted RBP17.4■□□□□ 0.38
SPIDR-221ENST00000523814 GTPBP10A4D1E9 387 aaKnown RBP17.39■□□□□ 0.37
SPIDR-221ENST00000523814 TMEM8BA6NDV4 472 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 LUC7L3O95232 432 aaKnown RBP17.39■□□□□ 0.37
SPIDR-221ENST00000523814 SEMA4FO95754 770 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 APOEP02649 317 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 GLI1P08151 1106 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 AFF3P51826 1226 aaKnown RBP17.39■□□□□ 0.37
SPIDR-221ENST00000523814 ST8SIA6P61647 398 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 CDH18Q13634 790 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 TAF5Q15542 800 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 ZNF423Q2M1K9 1284 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 HLA-BQ31612 363 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 ZNF776Q68DI1 518 aaPredicted RBP17.39■□□□□ 0.37
SPIDR-221ENST00000523814 GBP6Q6ZN66 633 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 DBX2Q6ZNG2 339 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 USP30Q70CQ3 517 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 NAXDQ8IW45 347 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 LGI2Q8N0V4 545 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 SHC3Q92529 594 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 BIRC7Q96CA5 298 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 GAREM1Q9H706 876 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.39■□□□□ 0.37
SPIDR-221ENST00000523814 KIAA1522Q9P206 1035 aaPredicted RBP17.39■□□□□ 0.37
SPIDR-221ENST00000523814 APEX2Q9UBZ4 518 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 SCML1Q9UN30 329 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 ERVW-1Q9UQF0 538 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 MSRB2Q9Y3D2 182 aa17.39■□□□□ 0.37
SPIDR-221ENST00000523814 KCNU1A8MYU2 1149 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 CBFA2T3O75081 653 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 CER1O95813 267 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 MOCS2O96007 188 aaPredicted RBP17.38■□□□□ 0.37
SPIDR-221ENST00000523814 SRPRAP08240 638 aaKnown RBP17.38■□□□□ 0.37
SPIDR-221ENST00000523814 TACR2P21452 398 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 PON1P27169 355 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 MATKP42679 507 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 CSNK1EP49674 416 aaKnown RBP17.38■□□□□ 0.37
SPIDR-221ENST00000523814 APBA1Q02410 837 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 PDCLQ13371 301 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 ARHGAP44Q17R89 818 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 EXOC3L4Q17RC7 722 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 TTC31Q49AM3 519 aaPredicted RBP17.38■□□□□ 0.37
SPIDR-221ENST00000523814 PITRM1Q5JRX3 1037 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 C9orf64Q5T6V5 341 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 MMS22LQ6ZRQ5 1243 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 RAB44Q7Z6P3 723 aaPredicted RBP17.38■□□□□ 0.37
SPIDR-221ENST00000523814 CREBRFQ8IUR6 639 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 MLKLQ8NB16 471 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 IL21RQ9HBE5 538 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 PCDHGC3Q9UN70 934 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 PCDHB9Q9Y5E1 797 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 SLCO1B1Q9Y6L6 691 aa17.38■□□□□ 0.37
SPIDR-221ENST00000523814 TARSL2A2RTX5 802 aaKnown RBP17.37■□□□□ 0.37
SPIDR-221ENST00000523814 RNASEH1O60930 286 aaKnown RBP17.37■□□□□ 0.37
SPIDR-221ENST00000523814 SIN3BO75182 1162 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 MOCS3O95396 460 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 SLC2A3P11169 496 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 CD27P26842 260 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 USP8P40818 1118 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 PITX1P78337 314 aaPredicted RBP17.37■□□□□ 0.37
SPIDR-221ENST00000523814 ECT2LQ008S8 904 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 SFSWAPQ12872 951 aaKnown RBP17.37■□□□□ 0.37
SPIDR-221ENST00000523814 EFHC1Q5JVL4 640 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 RAP1GAP2Q684P5 730 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 GLRX5Q86SX6 157 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 CHCHD4Q8N4Q1 142 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 PPP1R13BQ96KQ4 1090 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 SLC2A13Q96QE2 648 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 CPXM1Q96SM3 734 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 PRMT1Q99873 361 aaKnown RBP17.37■□□□□ 0.37
SPIDR-221ENST00000523814 PABPC3Q9H361 631 aaKnown RBP17.37■□□□□ 0.37
SPIDR-221ENST00000523814 TM9SF3Q9HD45 589 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 TM7SF3Q9NS93 570 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 ASNSD1Q9NWL6 643 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 TJP2Q9UDY2 1190 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 SLC12A6Q9UHW9 1150 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 SLCO3A1Q9UIG8 710 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 KLK13Q9UKR3 277 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 PCOLCE2Q9UKZ9 415 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 ZMIZ1Q9ULJ6 1067 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 NCKAP1Q9Y2A7 1128 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 PCDHGB2Q9Y5G2 931 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 AKAP13Q12802 2813 aa17.37■□□□□ 0.37
SPIDR-221ENST00000523814 A0A1B0GVT2 93 aa17.36■□□□□ 0.37
SPIDR-221ENST00000523814 CTSOP43234 321 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms