RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 TMA16Q96EY4 203 aaKnown RBP8.02□□□□□ -1.13
FAM49B-227ENST00000523514 TRIM11Q96F44 468 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 PCDHB18PQ96TA0 734 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 NPY6RQ99463 290 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 SYT11Q9BT88 431 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 SELENOOQ9BVL4 669 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 HAUS4Q9H6D7 363 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 FBRSL1Q9HCM7 1045 aaKnown RBP8.02□□□□□ -1.13
FAM49B-227ENST00000523514 METTL5Q9NRN9 209 aaKnown RBP8.02□□□□□ -1.13
FAM49B-227ENST00000523514 TMPRSS4Q9NRS4 437 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 TMEM59LQ9UK28 342 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 FBXO10Q9UK96 956 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 SLC8A2Q9UPR5 921 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 STARD13Q9Y3M8 1113 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 PCDHGA2Q9Y5H1 932 aa8.02□□□□□ -1.13
FAM49B-227ENST00000523514 SYNJ2BP-COX16A0A087WUM0 186 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 CCDC163A0A0D9SF12 145 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 GDF9O60383 454 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 GYPCP04921 128 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 SERPING1P05155 500 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 SP9P0CG40 484 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 MYBL1P10243 752 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 KRT3P12035 628 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 TACR2P21452 398 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 HOXD9P28356 352 aaPredicted RBP8.01□□□□□ -1.13
FAM49B-227ENST00000523514 HOXA6P31267 233 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 RDXP35241 583 aaKnown RBP8.01□□□□□ -1.13
FAM49B-227ENST00000523514 FLT3P36888 993 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 PTPN9P43378 593 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 CXCR3P49682 368 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 NHLH1Q02575 133 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 CSTF1Q05048 431 aaKnown RBP8.01□□□□□ -1.13
FAM49B-227ENST00000523514 DEUP1Q05D60 604 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 FOXC1Q12948 553 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 PTP4A2Q12974 167 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 NME3Q13232 169 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 GAS6Q14393 721 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 C2CD6Q53TS8 623 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 MS4A13Q5J8X5 152 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 EOGTQ5NDL2 527 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 PIK3R6Q5UE93 754 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 RNF43Q68DV7 783 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 SDE2Q6IQ49 451 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 DNAJC24Q6P3W2 148 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 ZNF571Q7Z3V5 609 aaPredicted RBP8.01□□□□□ -1.13
FAM49B-227ENST00000523514 CHSY1Q86X52 802 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 VSTM4Q8IW00 320 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 DRC7Q8IY82 874 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 MCOLN2Q8IZK6 566 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 MAML2Q8IZL2 1156 aaPredicted RBP8.01□□□□□ -1.13
FAM49B-227ENST00000523514 CAMKK1Q8N5S9 505 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 ZNF513Q8N8E2 541 aaPredicted RBP8.01□□□□□ -1.13
FAM49B-227ENST00000523514 WFIKKN2Q8TEU8 576 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 USP33Q8TEY7 942 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 UCMAQ8WVF2 138 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 EZH1Q92800 747 aaPredicted RBP8.01□□□□□ -1.13
FAM49B-227ENST00000523514 BHMTQ93088 406 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 FAM122AQ96E09 287 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 SEMA4AQ9H3S1 761 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 WDCPQ9H6R7 721 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 DNAAF2Q9NVR5 837 aaKnown RBP8.01□□□□□ -1.13
FAM49B-227ENST00000523514 ZNHIT6Q9NWK9 470 aaKnown RBP8.01□□□□□ -1.13
FAM49B-227ENST00000523514 ZSCAN32Q9NX65 697 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 PLK2Q9NYY3 685 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 COX16Q9P0S2 106 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 RAPGEFL1Q9UHV5 662 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 MMP17Q9ULZ9 603 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 SCINQ9Y6U3 715 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 PIEZO1Q92508 2521 aa8.01□□□□□ -1.13
FAM49B-227ENST00000523514 ATG2BQ96BY7 2078 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 C2CD4BA6NLJ0 364 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 SIGLEC16A6NMB1 481 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 TIMM44O43615 452 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 GFRA3O60609 400 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 TSPAN3O60637 253 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 TBL1XO60907 577 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 RTN2O75298 545 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 ALDH1A2O94788 518 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 ENDOD1O94919 500 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 CISD3P0C7P0 127 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 TDGF1P13385 188 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 PDGFRAP16234 1089 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 GPD1P21695 349 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 SLC6A4P31645 630 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 HNRNPH3P31942 346 aaKnown RBP8□□□□□ -1.13
FAM49B-227ENST00000523514 CASP14P31944 242 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 CNR2P34972 360 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 PLA2G5P39877 138 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 NBL1P41271 181 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 KIR2DL1P43626 348 aaPredicted RBP8□□□□□ -1.13
FAM49B-227ENST00000523514 DGKEP52429 567 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 SEC13P55735 322 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 OXCT1P55809 520 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 PITX1P78337 314 aaPredicted RBP8□□□□□ -1.13
FAM49B-227ENST00000523514 SATB1Q01826 763 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 CDH18Q13634 790 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 DMC1Q14565 340 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 ARL13BQ3SXY8 428 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 C2orf27AQ580R0 203 aa8□□□□□ -1.13
FAM49B-227ENST00000523514 OTUD1Q5VV17 481 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms