RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 KCNJ12Q14500 433 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 CBWD6Q4V339 395 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 CBWD3Q5JTY5 395 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 CBWD5Q5RIA9 395 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 MFN1Q8IWA4 741 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 UNC45BQ8IWX7 931 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 ZNF557Q8N988 423 aaPredicted RBP23.61■■□□□ 1.37
PVT1-218ENST00000523328 FIBINQ8TAL6 211 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 PIP4K2CQ8TBX8 421 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 SNX21Q969T3 373 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 NXPE2Q96DL1 559 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 CNDP2Q96KP4 475 aaKnown RBP23.61■■□□□ 1.37
PVT1-218ENST00000523328 PRICKLE1Q96MT3 831 aaPredicted RBP23.61■■□□□ 1.37
PVT1-218ENST00000523328 NEUROG2Q9H2A3 272 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 COQ4Q9Y3A0 265 aa23.61■■□□□ 1.37
PVT1-218ENST00000523328 A0A1W2PP55 124 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 ACSL4O60488 711 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 STX10O60499 249 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 RFPL3O75679 317 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 LDOC1O95751 146 aaPredicted RBP23.6■■□□□ 1.37
PVT1-218ENST00000523328 SETSIPP0DME0 302 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 LCP1P13796 627 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 JUPP14923 745 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 CD19P15391 556 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 CSKP41240 450 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 SYKP43405 635 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 SLC11A2P49281 568 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 ST8SIA6P61647 398 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 ARID5BQ14865 1188 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 CST6Q15828 149 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 C9orf64Q5T6V5 341 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 NUGGCQ68CJ6 796 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 NADSYN1Q6IA69 706 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 DHX40Q8IX18 779 aaKnown RBP23.6■■□□□ 1.37
PVT1-218ENST00000523328 UBR7Q8N806 425 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 AZIN2Q96A70 460 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 MYEOVQ96EZ4 313 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 STIM2Q9P246 746 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 ADAMTS1Q9UHI8 967 aa23.6■■□□□ 1.37
PVT1-218ENST00000523328 FAM237AA0A1B0GTK4 181 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 A0A1W2PR77 199 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 WNT9AO14904 365 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 TLX3O43711 291 aaPredicted RBP23.59■■□□□ 1.37
PVT1-218ENST00000523328 PRB1P04280 392 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 ASLP04424 464 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 ITGAVP06756 1048 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 C1SP09871 688 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 VDRP11473 427 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 CDK4P11802 303 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 CD38P28907 300 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 HNF1BP35680 557 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 EIF2S3P41091 472 aaKnown RBP23.59■■□□□ 1.37
PVT1-218ENST00000523328 ACADVLP49748 655 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 NDUFA8P51970 172 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 C6orf118Q5T5N4 469 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 KDM1BQ8NB78 822 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 HJURPQ8NCD3 748 aaPredicted RBP23.59■■□□□ 1.37
PVT1-218ENST00000523328 OR2T34Q8NGX1 318 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 SKA1Q96BD8 255 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 FZD4Q9ULV1 537 aa23.59■■□□□ 1.37
PVT1-218ENST00000523328 KALRNO60229 2985 aa23.58■■□□□ 1.37
PVT1-218ENST00000523328 LRRC72A6NJI9 287 aa23.58■■□□□ 1.37
PVT1-218ENST00000523328 RNASEH1O60930 286 aaKnown RBP23.58■■□□□ 1.37
PVT1-218ENST00000523328 ZIC2O95409 532 aaPredicted RBP23.58■■□□□ 1.37
PVT1-218ENST00000523328 EPB41P11171 864 aaKnown RBP23.58■■□□□ 1.37
PVT1-218ENST00000523328 ABCB4P21439 1286 aa23.58■■□□□ 1.37
PVT1-218ENST00000523328 RPS24P62847 133 aaKnown RBP23.58■■□□□ 1.37
PVT1-218ENST00000523328 SFSWAPQ12872 951 aaKnown RBP23.58■■□□□ 1.37
PVT1-218ENST00000523328 PMF1Q6P1K2 205 aa23.58■■□□□ 1.37
PVT1-218ENST00000523328 MMAAQ8IVH4 418 aaKnown RBP23.58■■□□□ 1.37
PVT1-218ENST00000523328 SLC35F5Q8WV83 523 aa23.58■■□□□ 1.37
PVT1-218ENST00000523328 IRGQQ8WZA9 623 aa23.58■■□□□ 1.37
PVT1-218ENST00000523328 TSC1Q92574 1164 aa23.58■■□□□ 1.37
PVT1-218ENST00000523328 PRORYQ9H606 182 aa23.58■■□□□ 1.37
PVT1-218ENST00000523328 AASDHPPTQ9NRN7 309 aa23.58■■□□□ 1.37
PVT1-218ENST00000523328 DOCK9Q9BZ29 2069 aa23.58■■□□□ 1.36
PVT1-218ENST00000523328 FLNBO75369 2602 aaKnown RBP23.57■■□□□ 1.36
PVT1-218ENST00000523328 RNASEH2AO75792 299 aaKnown RBP23.57■■□□□ 1.36
PVT1-218ENST00000523328 C1QL1O75973 258 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 EPHA8P29322 1005 aaPredicted RBP23.57■■□□□ 1.36
PVT1-218ENST00000523328 RGS7P49802 495 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 CCR5P51681 352 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 TBX4P57082 545 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 YWHAEP62258 255 aaKnown RBP23.57■■□□□ 1.36
PVT1-218ENST00000523328 FSCBQ5H9T9 825 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 LCLAT1Q6UWP7 414 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 MMS22LQ6ZRQ5 1243 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 EID2Q8N6I1 236 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 CLEC4CQ8WTT0 213 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 TFAP2BQ92481 460 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 OMDQ99983 421 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 GDF3Q9NR23 364 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 ERVW-1Q9UQF0 538 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 ITIH6Q6UXX5 1313 aa23.57■■□□□ 1.36
PVT1-218ENST00000523328 TARSL2A2RTX5 802 aaKnown RBP23.56■■□□□ 1.36
PVT1-218ENST00000523328 TTC34A8MYJ7 566 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 PIK3R2O00459 728 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 CETN3O15182 167 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 YKT6O15498 198 aa23.56■■□□□ 1.36
PVT1-218ENST00000523328 LTFP02788 710 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms