RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 APOEP02649 317 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 ZNF883P0CG24 379 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 GNA15P30679 374 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 USP8P40818 1118 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 MATKP42679 507 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 CSNK1EP49674 416 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 AFF3P51826 1226 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 BNC1Q01954 994 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 CDH18Q13634 790 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 ARID5BQ14865 1188 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 CAMK4Q16566 473 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 HLA-BQ31612 363 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 HNRNPA1L2Q32P51 320 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 TTC31Q49AM3 519 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 ZC3H12AQ5D1E8 599 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 FSCBQ5H9T9 825 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 GJB7Q6PEY0 223 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 TRIM65Q6PJ69 517 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 GBP6Q6ZN66 633 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 LGI2Q8N0V4 545 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 KDM1BQ8NB78 822 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 SNX19Q92543 992 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 GATA6Q92908 595 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 BTN2A3PQ96KV6 586 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 RSPH9Q9H1X1 276 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 MTG2Q9H4K7 406 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 IL21RQ9HBE5 538 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 SGK2Q9HBY8 427 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 ACP6Q9NPH0 428 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 KIAA1522Q9P206 1035 aaPredicted RBP12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 SLC12A6Q9UHW9 1150 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 KLK13Q9UKR3 277 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 INTS6Q9UL03 887 aaKnown RBP12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 NCKAP1Q9Y2A7 1128 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 MSRB2Q9Y3D2 182 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 CHD6Q8TD26 2715 aa12.18□□□□□ -0.46
CTNNA1-237ENST00000523275 A0A1B0GVT2 93 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 BECN2A8MW95 431 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 RNASEH1O60930 286 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 SIN3BO75182 1162 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 FSBPO95073 299 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 LUC7L3O95232 432 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 MOCS3O95396 460 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 SLC9A1P19634 815 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 TACR2P21452 398 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 SFSWAPQ12872 951 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 PDCLQ13371 301 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 TAF5Q15542 800 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 TEAD4Q15561 434 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 ARHGAP44Q17R89 818 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 PITRM1Q5JRX3 1037 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 MMS22LQ6ZRQ5 1243 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 USP30Q70CQ3 517 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 CHCHD4Q8N4Q1 142 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 GANCQ8TET4 914 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 SETD7Q8WTS6 366 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 BIRC7Q96CA5 298 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 MYO19Q96H55 970 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 MRGPRX3Q96LB0 322 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 PABPC3Q9H361 631 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 OSGEPQ9NPF4 335 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 TM7SF3Q9NS93 570 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 APEX2Q9UBZ4 518 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 TJP2Q9UDY2 1190 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 XPO7Q9UIA9 1087 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 ZMIZ1Q9ULJ6 1067 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 SCML1Q9UN30 329 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
CTNNA1-237ENST00000523275 KNL1Q8NG31 2342 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 TARSL2A2RTX5 802 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 GTPBP10A4D1E9 387 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 FAM221BA6H8Z2 402 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 KCNU1A8MYU2 1149 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 CBFA2T3O75081 653 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 IGLV3-25P01717 112 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 GLI1P08151 1106 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 SRPRAP08240 638 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 SLC2A3P11169 496 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 CD27P26842 260 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 PON1P27169 355 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 CTSOP43234 321 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 UBE2HP62256 183 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 CDK17Q00537 523 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 ECT2LQ008S8 904 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 APBA1Q02410 837 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 EXOC3L4Q17RC7 722 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 KIF19Q2TAC6 998 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 EFHC1Q5JVL4 640 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 C9orf64Q5T6V5 341 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 RAP1GAP2Q684P5 730 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 SMYD5Q6GMV2 418 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 RAB44Q7Z6P3 723 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 CHSY1Q86X52 802 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 IRF2BP1Q8IU81 584 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 DHX40Q8IX18 779 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 WDTC1Q8N5D0 677 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 ATP6V0D2Q8N8Y2 350 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 SHC3Q92529 594 aa12.16□□□□□ -0.46
CTNNA1-237ENST00000523275 PPP1R13BQ96KQ4 1090 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms