RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 MIF4GDA9UHW6 222 aaKnown RBP12.32□□□□□ -0.44
PVT1-215ENST00000522963 FAM72CH0Y354 149 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 FANCGO15287 622 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 NCAM2O15394 837 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 GLULP15104 373 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 MSNP26038 577 aaKnown RBP12.32□□□□□ -0.44
PVT1-215ENST00000522963 SLC6A4P31645 630 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 L1CAMP32004 1257 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 GJA4P35212 333 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 PEX5P50542 639 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 DNA2P51530 1060 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 ARSEP51690 589 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 MLLT6P55198 1093 aaPredicted RBP12.32□□□□□ -0.44
PVT1-215ENST00000522963 DPYSL2Q16555 572 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 FAM133BQ5BKY9 247 aaKnown RBP12.32□□□□□ -0.44
PVT1-215ENST00000522963 ARTNQ5T4W7 220 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 FAM72AQ5TYM5 149 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 RAP1GAP2Q684P5 730 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 NAIF1Q69YI7 327 aaPredicted RBP12.32□□□□□ -0.44
PVT1-215ENST00000522963 FAM72DQ6L9T8 149 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 FAM72BQ86X60 149 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 PSTKQ8IV42 348 aaKnown RBP12.32□□□□□ -0.44
PVT1-215ENST00000522963 FAM217AQ8IXS0 508 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 CCDC105Q8IYK2 499 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 RAPGEF5Q92565 580 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 ALG3Q92685 438 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 MYEOVQ96EZ4 313 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 NELL2Q99435 816 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 PRMT1Q99873 361 aaKnown RBP12.32□□□□□ -0.44
PVT1-215ENST00000522963 LMAN1LQ9HAT1 526 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 PCDH18Q9HCL0 1135 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 RBM12Q9NTZ6 932 aaKnown RBP12.32□□□□□ -0.44
PVT1-215ENST00000522963 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.32□□□□□ -0.44
PVT1-215ENST00000522963 TBC1D14Q9P2M4 693 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 STOML2Q9UJZ1 356 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 ZNF510Q9Y2H8 683 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 JRKLQ9Y4A0 524 aa12.32□□□□□ -0.44
PVT1-215ENST00000522963 MUC3AQ02505 3323 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 GFRA2O00451 464 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 ENC1O14682 589 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 TRDMT1O14717 391 aaKnown RBP12.31□□□□□ -0.44
PVT1-215ENST00000522963 KRT1P04264 644 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
PVT1-215ENST00000522963 CYP17A1P05093 508 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 CD48P09326 243 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 TACR2P21452 398 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 CDH6P55285 790 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 RWDD2BP57060 319 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 ETF1P62495 437 aaKnown RBP12.31□□□□□ -0.44
PVT1-215ENST00000522963 AMPD2Q01433 879 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 NRG1Q02297 640 aaPredicted RBP12.31□□□□□ -0.44
PVT1-215ENST00000522963 SEMA3BQ13214 749 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 MTA1Q13330 715 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 AUHQ13825 339 aaKnown RBP12.31□□□□□ -0.44
PVT1-215ENST00000522963 DHCR24Q15392 516 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 RPS6KA1Q15418 735 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 ANO4Q32M45 955 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 LY6G5CQ5SRR4 150 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 ZFYVE27Q5T4F4 411 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 ADGRF1Q5T601 910 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 MANEALQ5VSG8 457 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 RFWD3Q6PCD5 774 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 TPGS1Q6ZTW0 290 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 CHSY1Q86X52 802 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 KATNAL2Q8IYT4 538 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 ZNF683Q8IZ20 524 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 ADGRG2Q8IZP9 1017 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 UBL4BQ8N7F7 174 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 KIAA1958Q8N8K9 716 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 DTWD2Q8NBA8 298 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 KCTD6Q8NC69 237 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 FAM71BQ8TC56 605 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 UBE2Q2Q8WVN8 375 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 CHFRQ96EP1 664 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 C1orf74Q96LT6 269 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 C16orf45Q96MC5 204 aaPredicted RBP12.31□□□□□ -0.44
PVT1-215ENST00000522963 SPATA6Q9NWH7 488 aaPredicted RBP12.31□□□□□ -0.44
PVT1-215ENST00000522963 DDX56Q9NY93 547 aaKnown RBP12.31□□□□□ -0.44
PVT1-215ENST00000522963 OR12D3Q9UGF7 316 aa12.31□□□□□ -0.44
PVT1-215ENST00000522963 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.31□□□□□ -0.44
PVT1-215ENST00000522963 LRRD1A4D1F6 860 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 C3orf70A6NLC5 250 aaPredicted RBP12.3□□□□□ -0.44
PVT1-215ENST00000522963 ESPNB1AK53 854 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 E9PAM4 449 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 CREB3O43889 395 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 TSPAN3O60637 253 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 LRIG2O94898 1065 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 ADH1CP00326 375 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 ADH5P11766 374 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 KDELR1P24390 212 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 GALK1P51570 392 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 SGSHP51688 502 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 GRSF1Q12849 480 aaKnown RBP eCLIP12.3□□□□□ -0.44
PVT1-215ENST00000522963 MMRN1Q13201 1228 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 DPYSL3Q14195 570 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 KRT81Q14533 505 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 PPP6R3Q5H9R7 873 aaPredicted RBP12.3□□□□□ -0.44
PVT1-215ENST00000522963 DCAF12L1Q5VU92 463 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
PVT1-215ENST00000522963 RHBDF2Q6PJF5 856 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms