RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 NDOR1Q9UHB4 597 aa16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 TDRKHQ9Y2W6 561 aaKnown RBP16.6■□□□□ 0.25
PCDHA3-201ENST00000522353 CYLC2Q14093 348 aaPredicted RBP16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 GRTP1Q5TC63 336 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 LACRTQ9GZZ8 138 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 EXOSC4Q9NPD3 245 aaKnown RBP16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 PTCH2Q9Y6C5 1203 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 OR6C75A6NL08 312 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 ZBTB14O43829 449 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 ALBP02768 609 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 GRIK5Q16478 980 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 CYP2A13Q16696 494 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 KCNT2Q6UVM3 1135 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 GALNT4Q8N4A0 578 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 FBXO39Q8N4B4 442 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 OR12D3Q9UGF7 316 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 CPSF4O95639 269 aaKnown RBP16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 CATP04040 527 aaKnown RBP16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 TPH1P17752 444 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 PMS1P54277 932 aaKnown RBP16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 NFYCQ13952 458 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 ZCCHC8Q6NZY4 707 aaKnown RBP16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 VPS50Q96JG6 964 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 SYT17Q9BSW7 474 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 ZDHHC6Q9H6R6 413 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 ZNF229Q9UJW7 825 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 DAB1O75553 588 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 ITGB6P18564 788 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 RTP1P59025 263 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 ZNF470Q6ECI4 717 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 DOK6Q6PKX4 331 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 LRRC49Q8IUZ0 686 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 LRRC34Q8IZ02 419 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 TEX9Q8N6V9 391 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 PPTC7Q8NI37 304 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 MDM1Q8TC05 714 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 EPS8L3Q8TE67 593 aaKnown RBP16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 PPP1R10Q96QC0 940 aaKnown RBP16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 PRRG3Q9BZD7 231 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 NUDT5Q9UKK9 219 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 V9GYQ6 96 aa16.59■□□□□ 0.25
PCDHA3-201ENST00000522353 APOC4-APOC2K7ER74 178 aa16.58■□□□□ 0.25
PCDHA3-201ENST00000522353 APOC2P02655 101 aa16.58■□□□□ 0.25
PCDHA3-201ENST00000522353 PRKAA2P54646 552 aa16.58■□□□□ 0.25
PCDHA3-201ENST00000522353 PLIN5Q00G26 463 aa16.58■□□□□ 0.25
PCDHA3-201ENST00000522353 ITGA7Q13683 1181 aa16.58■□□□□ 0.25
PCDHA3-201ENST00000522353 TRAPPC5Q8IUR0 188 aa16.58■□□□□ 0.25
PCDHA3-201ENST00000522353 CEP41Q9BYV8 373 aa16.58■□□□□ 0.25
PCDHA3-201ENST00000522353 TRPC4Q9UBN4 977 aa16.58■□□□□ 0.25
PCDHA3-201ENST00000522353 HES2Q9Y543 173 aa16.58■□□□□ 0.25
PCDHA3-201ENST00000522353 ZSCAN5CA6NGD5 496 aaPredicted RBP16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 KCNA3P22001 575 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 PCYT1AP49585 367 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 SMARCB1Q12824 385 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 CAPSQ13938 189 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 ATAD3BQ5T9A4 648 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 KIAA1324Q6UXG2 1013 aaKnown RBP16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 ACO2Q99798 780 aaKnown RBP16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 EIF4E1BA6NMX2 242 aaKnown RBP16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 VAPBO95292 243 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 NFICP08651 508 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 GTF2E2P29084 291 aaKnown RBP16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 FUT11Q495W5 492 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 CENPLQ8N0S6 344 aaPredicted RBP16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 KIF2BQ8N4N8 673 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 COL1A2P08123 1366 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 TM9SF1O15321 606 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 GLUD1P00367 558 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 LAG3P18627 525 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 CPA2P48052 419 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 ZNF655Q8N720 491 aaPredicted RBP16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 HJURPQ8NCD3 748 aaPredicted RBP16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 TMEM161BQ8NDZ6 487 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 KRT84Q9NSB2 600 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 HEY2Q9UBP5 337 aa16.58■□□□□ 0.24
PCDHA3-201ENST00000522353 LOC102724159A0A0B4J2E5 919 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 KATNA1O75449 491 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 PWP2Q15269 919 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 FAM46CQ5VWP2 391 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 MFSD7Q6UXD7 560 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 LRRC52Q8N7C0 313 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 SLAIN1Q8ND83 568 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 GUCY1B2O75343 617 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 CDC25CP30307 473 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 SKIV2L2P42285 1042 aaKnown RBP16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 ALDH9A1P49189 494 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 PEX5P50542 639 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 ITIH4Q14624 930 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 NT5DC1Q5TFE4 455 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 TATDN1Q6P1N9 297 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 FAM105AQ9NUU6 356 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 SMIM35A0A1B0GVV1 85 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 DNALI1O14645 258 aaPredicted RBP16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 FGF19O95750 216 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 GRM5P41594 1212 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 INSCQ1MX18 579 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 ANKRD52Q8NB46 1076 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 ZNF862O60290 1169 aa16.57■□□□□ 0.24
PCDHA3-201ENST00000522353 TYMPP19971 482 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms