RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 FKBP15Q5T1M5 1219 aa17.64■□□□□ 0.41
SQLE-205ENST00000521232 CCDC183Q5T5S1 534 aa17.64■□□□□ 0.41
SQLE-205ENST00000521232 NOP9Q86U38 636 aaKnown RBP17.64■□□□□ 0.41
SQLE-205ENST00000521232 CHSY1Q86X52 802 aa17.64■□□□□ 0.41
SQLE-205ENST00000521232 CCDC117Q8IWD4 279 aaPredicted RBP17.64■□□□□ 0.41
SQLE-205ENST00000521232 CEP76Q8TAP6 659 aa17.64■□□□□ 0.41
SQLE-205ENST00000521232 RNF34Q969K3 372 aa17.64■□□□□ 0.41
SQLE-205ENST00000521232 C18orf8Q96DM3 657 aa17.64■□□□□ 0.41
SQLE-205ENST00000521232 MYO19Q96H55 970 aa17.64■□□□□ 0.41
SQLE-205ENST00000521232 RRN3Q9NYV6 651 aa17.64■□□□□ 0.41
SQLE-205ENST00000521232 KIAA1522Q9P206 1035 aaPredicted RBP17.64■□□□□ 0.41
SQLE-205ENST00000521232 SUN2Q9UH99 717 aa17.64■□□□□ 0.41
SQLE-205ENST00000521232 DAAM1Q9Y4D1 1078 aa17.64■□□□□ 0.41
SQLE-205ENST00000521232 CACNA1EQ15878 2313 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 C4orf47A7E2U8 309 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 F5H5T6 163 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 CDX4O14627 284 aaPredicted RBP17.63■□□□□ 0.41
SQLE-205ENST00000521232 LSM8O95777 96 aaKnown RBP17.63■□□□□ 0.41
SQLE-205ENST00000521232 ASLP04424 464 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 SCNN1AP37088 669 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 CSKP41240 450 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 COPB1P53618 953 aaKnown RBP17.63■□□□□ 0.41
SQLE-205ENST00000521232 CDH18Q13634 790 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 DUOXA1Q1HG43 343 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 PPM1JQ5JR12 505 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 TAF3Q5VWG9 929 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 MMS22LQ6ZRQ5 1243 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 ERICH1Q86X53 443 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 ZNF677Q86XU0 584 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 KDM1BQ8NB78 822 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 EPS8L1Q8TE68 723 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 FOXJ1Q92949 421 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 NT5C3BQ969T7 300 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 TOE1Q96GM8 510 aaKnown RBP17.63■□□□□ 0.41
SQLE-205ENST00000521232 NPY6RQ99463 290 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 NUSAP1Q9BXS6 441 aaKnown RBP17.63■□□□□ 0.41
SQLE-205ENST00000521232 FBRSQ9HAH7 460 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 PRSS16Q9NQE7 514 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.63■□□□□ 0.41
SQLE-205ENST00000521232 SIK3Q9Y2K2 1263 aa17.63■□□□□ 0.41
SQLE-205ENST00000521232 ASCC3Q8N3C0 2202 aaKnown RBP17.63■□□□□ 0.41
SQLE-205ENST00000521232 SYNJ2BP-COX16A0A087WUM0 186 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 H0Y626 953 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 M0QYT0 321 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 ACADMP11310 421 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 ZNF18P17022 549 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 JAM2P57087 298 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 POLR2FP61218 127 aaKnown RBP17.62■□□□□ 0.41
SQLE-205ENST00000521232 NME3Q13232 169 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 NCAPHQ15003 741 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 PITRM1Q5JRX3 1037 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 TTC39BQ5VTQ0 682 aaPredicted RBP17.62■□□□□ 0.41
SQLE-205ENST00000521232 RABEPKQ7Z6M1 372 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 XYLT1Q86Y38 959 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 ZNF366Q8N895 744 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 ANKRD20A12PQ8NF67 263 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 CADM4Q8NFZ8 388 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 PGAP3Q96FM1 320 aaPredicted RBP17.62■□□□□ 0.41
SQLE-205ENST00000521232 MRGPRX3Q96LB0 322 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 HSPA12BQ96MM6 686 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 NUP58Q9BVL2 599 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 TMEM9BQ9NQ34 198 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 FAM207AQ9NSI2 230 aaPredicted RBP17.62■□□□□ 0.41
SQLE-205ENST00000521232 TMEM51Q9NW97 253 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 COX16Q9P0S2 106 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 NOCTQ9UK39 431 aaKnown RBP17.62■□□□□ 0.41
SQLE-205ENST00000521232 SLC6A14Q9UN76 642 aa17.62■□□□□ 0.41
SQLE-205ENST00000521232 EPHB6O15197 1021 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 MOCS3O95396 460 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 SRPRAP08240 638 aaKnown RBP17.61■□□□□ 0.41
SQLE-205ENST00000521232 MMEP08473 750 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 SERPINF2P08697 491 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 CXCR3P49682 368 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 RNASE9P60153 205 aaKnown RBP17.61■□□□□ 0.41
SQLE-205ENST00000521232 ST8SIA6P61647 398 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 NOMO3P69849 1222 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 ZBTB16Q05516 673 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 SLC12A1Q13621 1099 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 AUHQ13825 339 aaKnown RBP17.61■□□□□ 0.41
SQLE-205ENST00000521232 ARID5BQ14865 1188 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 NUMA1Q14980 2115 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 RABGAP1LQ5R372 815 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 SYCP2LQ5T4T6 812 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 OTUD1Q5VV17 481 aaPredicted RBP17.61■□□□□ 0.41
SQLE-205ENST00000521232 DAB2IPQ5VWQ8 1189 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 FBXL22Q6P050 247 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 CCAR2Q8N163 923 aaKnown RBP17.61■□□□□ 0.41
SQLE-205ENST00000521232 DNASE2BQ8WZ79 361 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 ADAM33Q9BZ11 813 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 HSD3B7Q9H2F3 369 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 CAPN10Q9HC96 672 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 STAP1Q9ULZ2 295 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 ERVW-1Q9UQF0 538 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 HS3ST4Q9Y661 456 aa17.61■□□□□ 0.41
SQLE-205ENST00000521232 ATXN2Q99700 1313 aaKnown RBP17.61■□□□□ 0.41
SQLE-205ENST00000521232 LGALS16A8MUM7 142 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 GFPT2O94808 682 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 F9P00740 461 aa17.6■□□□□ 0.41
SQLE-205ENST00000521232 CYP1A1P04798 512 aaPredicted RBP17.6■□□□□ 0.41
SQLE-205ENST00000521232 ADRB1P08588 477 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms